RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 TOP1P11387 765 aaKnown RBP20.87■□□□□ 0.93
SFXN1-212ENST00000515791 SLC4A3P48751 1232 aa20.87■□□□□ 0.93
SFXN1-212ENST00000515791 SNAP25P60880 206 aa20.87■□□□□ 0.93
SFXN1-212ENST00000515791 TTBK2Q6IQ55 1244 aa20.87■□□□□ 0.93
SFXN1-212ENST00000515791 MFSD6Q6ZSS7 791 aa20.87■□□□□ 0.93
SFXN1-212ENST00000515791 TOMM22Q9NS69 142 aa20.87■□□□□ 0.93
SFXN1-212ENST00000515791 DIAPH3Q9NSV4 1193 aa20.87■□□□□ 0.93
SFXN1-212ENST00000515791 CTDP1Q9Y5B0 961 aaPredicted RBP20.87■□□□□ 0.93
SFXN1-212ENST00000515791 HIP1O00291 1037 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 SNHG28P0DPA3 235 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 MAGEA10P43363 369 aaPredicted RBP20.86■□□□□ 0.93
SFXN1-212ENST00000515791 SNX17Q15036 470 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 TTC22Q5TAA0 569 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 SLC39A5Q6ZMH5 540 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 ANKRD35Q8N283 1001 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 FAM133AQ8N9E0 248 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 TTC14Q96N46 770 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 KATNBL1Q9H079 304 aa20.86■□□□□ 0.93
SFXN1-212ENST00000515791 RANBP17Q9H2T7 1088 aaKnown RBP20.86■□□□□ 0.93
SFXN1-212ENST00000515791 A1CFQ9NQ94 594 aaKnown RBP20.86■□□□□ 0.93
SFXN1-212ENST00000515791 ASTN1O14525 1302 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 MCM3APO60318 1980 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 LCTP09848 1927 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 ZNF213O14771 459 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 ADAMTS4O75173 837 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 PDHBP11177 359 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 ATN1P54259 1190 aaPredicted RBP20.85■□□□□ 0.93
SFXN1-212ENST00000515791 CNTN2Q02246 1040 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 TKFCQ3LXA3 575 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 LENG1Q96BZ8 264 aaPredicted RBP20.85■□□□□ 0.93
SFXN1-212ENST00000515791 ACAD9Q9H845 621 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 XPNPEP3Q9NQH7 507 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 HOMER2Q9NSB8 354 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 RNF146Q9NTX7 359 aa20.85■□□□□ 0.93
SFXN1-212ENST00000515791 ADCY6O43306 1168 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 RARBP10826 455 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 AKR1A1P14550 325 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 SLC16A2P36021 539 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 IKQ13123 557 aaPredicted RBP20.84■□□□□ 0.93
SFXN1-212ENST00000515791 MUM1L1Q5H9M0 696 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 TRERF1Q96PN7 1200 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 RNF41Q9H4P4 317 aaPredicted RBP20.84■□□□□ 0.93
SFXN1-212ENST00000515791 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.84■□□□□ 0.93
SFXN1-212ENST00000515791 PHF24Q9UPV7 400 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 MTMR7Q9Y216 660 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 CNPY2Q9Y2B0 182 aa20.84■□□□□ 0.93
SFXN1-212ENST00000515791 SOWAHBA6NEL2 793 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 KBTBD13C9JR72 458 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 SOX1O00570 391 aaPredicted RBP20.83■□□□□ 0.93
SFXN1-212ENST00000515791 PGK1P00558 417 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 ADCYAP1R1P41586 468 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 RTP1P59025 263 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 ACVR2BQ13705 512 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 C1orf53Q5VUE5 145 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 CCSAPQ6IQ19 270 aaPredicted RBP20.83■□□□□ 0.93
SFXN1-212ENST00000515791 CCDC174Q6PII3 467 aa20.83■□□□□ 0.93
SFXN1-212ENST00000515791 ISY1Q9ULR0 285 aaKnown RBP20.83■□□□□ 0.93
SFXN1-212ENST00000515791 FRMPD2Q68DX3 1309 aaPredicted RBP20.82■□□□□ 0.92
SFXN1-212ENST00000515791 ICAM1P05362 532 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 ALAS1P13196 640 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 NT5C2P49902 561 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 ZNF543Q08ER8 600 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 CCDC96Q2M329 555 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 SYDE2Q5VT97 1194 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 ARMCX2Q7L311 632 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 DGKHQ86XP1 1220 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 CCDC144CPQ8IYA2 1237 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 KLHDC9Q8NEP7 349 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 ANKS1AQ92625 1134 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 ESR2Q92731 530 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 ZKSCAN3Q9BRR0 538 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 CYP39A1Q9NYL5 469 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 FAM184BQ9ULE4 1060 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 LTBP2Q14767 1821 aa20.82■□□□□ 0.92
SFXN1-212ENST00000515791 LRRC37A2A6NM11 1700 aa20.81■□□□□ 0.92
SFXN1-212ENST00000515791 IRX5P78411 483 aaPredicted RBP20.81■□□□□ 0.92
SFXN1-212ENST00000515791 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
SFXN1-212ENST00000515791 ABHD16BQ9H3Z7 469 aa20.81■□□□□ 0.92
SFXN1-212ENST00000515791 GPCPD1Q9NPB8 672 aa20.81■□□□□ 0.92
SFXN1-212ENST00000515791 SYNRGQ9UMZ2 1314 aa20.8■□□□□ 0.92
SFXN1-212ENST00000515791 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
SFXN1-212ENST00000515791 POTEB2H3BUK9 544 aa20.8■□□□□ 0.92
SFXN1-212ENST00000515791 KDM4AO75164 1064 aa20.8■□□□□ 0.92
SFXN1-212ENST00000515791 RNF180Q86T96 592 aa20.8■□□□□ 0.92
SFXN1-212ENST00000515791 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
SFXN1-212ENST00000515791 ZHX1Q9UKY1 873 aaPredicted RBP20.8■□□□□ 0.92
SFXN1-212ENST00000515791 CCPG1Q9ULG6 757 aa20.8■□□□□ 0.92
SFXN1-212ENST00000515791 MYADML2A6NDP7 307 aa20.79■□□□□ 0.92
SFXN1-212ENST00000515791 B4E1Z4 1266 aa20.79■□□□□ 0.92
SFXN1-212ENST00000515791 DUSP11O75319 330 aaKnown RBP20.79■□□□□ 0.92
SFXN1-212ENST00000515791 MYCNP04198 464 aaPredicted RBP20.79■□□□□ 0.92
SFXN1-212ENST00000515791 CHMLP26374 656 aa20.79■□□□□ 0.92
SFXN1-212ENST00000515791 CCDC144BQ3MJ40 725 aa20.79■□□□□ 0.92
SFXN1-212ENST00000515791 TRIM60Q495X7 471 aa20.79■□□□□ 0.92
SFXN1-212ENST00000515791 DDX49Q9Y6V7 483 aaKnown RBP20.79■□□□□ 0.92
SFXN1-212ENST00000515791 A0A1W2PQ45 241 aaPredicted RBP20.78■□□□□ 0.92
SFXN1-212ENST00000515791 A0A1W2PQY0 241 aa20.78■□□□□ 0.92
SFXN1-212ENST00000515791 CTAGE5O15320 804 aa20.78■□□□□ 0.92
SFXN1-212ENST00000515791 NKX3-2P78367 333 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms