RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 ZKSCAN3Q9BRR0 538 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 ZSWIM5Q9P217 1185 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 MTMR7Q9Y216 660 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 FRMPD2Q68DX3 1309 aaPredicted RBP17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 ALPK3Q96L96 1907 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 ICAM1P05362 532 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 CYP21A2P08686 494 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 BMP2KLQ5H9B9 411 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 SYDE2Q5VT97 1194 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 MAMDC4Q6UXC1 1216 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 C11orf49Q9H6J7 331 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 RNF146Q9NTX7 359 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 PFASO15067 1338 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 TNKSO95271 1327 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 SYNGAP1Q96PV0 1343 aa17.42■□□□□ 0.38
HMGCLL1-209ENST00000515546 H0YGN5 161 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 CNGA1P29973 690 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 SLC16A2P36021 539 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 SNAP25P60880 206 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 ANKRD35Q8N283 1001 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 PNMA1Q8ND90 353 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 DPF3Q92784 378 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 MAP4K1Q92918 833 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 GPCPD1Q9NPB8 672 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 HOMER2Q9NSB8 354 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 TAF6LQ9Y6J9 622 aa17.41■□□□□ 0.38
HMGCLL1-209ENST00000515546 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
HMGCLL1-209ENST00000515546 PRAMEF19Q5SWL8 479 aa17.4■□□□□ 0.38
HMGCLL1-209ENST00000515546 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
HMGCLL1-209ENST00000515546 FAM133AQ8N9E0 248 aa17.4■□□□□ 0.38
HMGCLL1-209ENST00000515546 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
HMGCLL1-209ENST00000515546 DNM1LO00429 736 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 ZNF865P0CJ78 1059 aaPredicted RBP17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 TAL1P17542 331 aaPredicted RBP17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 SEC23AQ15436 765 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 CYB5R4Q7L1T6 521 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 TRERF1Q96PN7 1200 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 ESYT1Q9BSJ8 1104 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 CCPG1Q9ULG6 757 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 WDR19Q8NEZ3 1342 aa17.39■□□□□ 0.37
HMGCLL1-209ENST00000515546 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 SNAI1O95863 264 aaPredicted RBP17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 ALAS1P13196 640 aa17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 MUM1L1Q5H9M0 696 aa17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 LSG1Q9H089 658 aaKnown RBP17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 CNPY2Q9Y2B0 182 aa17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 NR2E3Q9Y5X4 410 aa17.38■□□□□ 0.37
HMGCLL1-209ENST00000515546 E7EWF7 191 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 POTEB2H3BUK9 544 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 EVI5O60447 810 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 CNTN2Q02246 1040 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 TRDNQ13061 729 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 ASPRV1Q53RT3 343 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 CYP39A1Q9NYL5 469 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 PNMA2Q9UL42 364 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 RBM8AQ9Y5S9 174 aaKnown RBP17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 ASTN1O14525 1302 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 LCTP09848 1927 aa17.37■□□□□ 0.37
HMGCLL1-209ENST00000515546 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 SOWAHBA6NEL2 793 aa17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 GOLGA8HP0CJ92 632 aa17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 AKR1A1P14550 325 aa17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 IFIT1BQ5T764 474 aaKnown RBP17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 ARRDC4Q8NCT1 418 aa17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 KATNBL1Q9H079 304 aa17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.36■□□□□ 0.37
HMGCLL1-209ENST00000515546 RARBP10826 455 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 ANO1Q5XXA6 986 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 ARMCX2Q7L311 632 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 MB21D2Q8IYB1 491 aaPredicted RBP17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 CLEC4DQ8WXI8 215 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 CCDC136Q96JN2 1154 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 XPNPEP3Q9NQH7 507 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
HMGCLL1-209ENST00000515546 NFIBO00712 420 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 ANTXR2P58335 489 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 ACVR2BQ13705 512 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 LRRC41Q15345 812 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 LRRC26Q2I0M4 334 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 GJC2Q5T442 439 aaPredicted RBP17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 KIAA1211Q6ZU35 1233 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 RALYLQ86SE5 291 aaKnown RBP17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 CCDC144CPQ8IYA2 1237 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 NCOA7Q8NI08 942 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 UBA5Q9GZZ9 404 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 PRO3102Q9H379 93 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 CPVLQ9H3G5 476 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 ABHD16BQ9H3Z7 469 aa17.34■□□□□ 0.37
HMGCLL1-209ENST00000515546 KBTBD13C9JR72 458 aa17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 ADAMTS4O75173 837 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms