RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 RFC2P35250 354 aa16.4■□□□□ 0.22
SMAD1-216ENST00000515527 GSTO1P78417 241 aa16.4■□□□□ 0.22
SMAD1-216ENST00000515527 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
SMAD1-216ENST00000515527 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
SMAD1-216ENST00000515527 ASIC4Q96FT7 647 aa16.4■□□□□ 0.22
SMAD1-216ENST00000515527 SEZ6LQ9BYH1 1024 aa16.4■□□□□ 0.22
SMAD1-216ENST00000515527 BAIAP3O94812 1187 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 MKRN4PQ13434 485 aaPredicted RBP16.39■□□□□ 0.21
SMAD1-216ENST00000515527 CCDC144BQ3MJ40 725 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 RPAINQ86UA6 219 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 MAPKAPK5Q8IW41 473 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 SH3RF3Q8TEJ3 882 aaPredicted RBP16.39■□□□□ 0.21
SMAD1-216ENST00000515527 ZNF384Q8TF68 577 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 CEP250Q9BV73 2442 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 GRIN2DO15399 1336 aa16.39■□□□□ 0.21
SMAD1-216ENST00000515527 SETXQ7Z333 2677 aaKnown RBP16.38■□□□□ 0.21
SMAD1-216ENST00000515527 A0A1B0GUL7 405 aa16.38■□□□□ 0.21
SMAD1-216ENST00000515527 ACVR2BQ13705 512 aa16.38■□□□□ 0.21
SMAD1-216ENST00000515527 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
SMAD1-216ENST00000515527 TSR2Q969E8 191 aaKnown RBP16.38■□□□□ 0.21
SMAD1-216ENST00000515527 RAD9AQ99638 391 aa16.38■□□□□ 0.21
SMAD1-216ENST00000515527 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
SMAD1-216ENST00000515527 MYO7AQ13402 2215 aa16.38■□□□□ 0.21
SMAD1-216ENST00000515527 MCM3APO60318 1980 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 CTAGE5O15320 804 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 SUPT20HL2P0C7V6 817 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 LTBRP36941 435 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 WDR5P61964 334 aaKnown RBP16.37■□□□□ 0.21
SMAD1-216ENST00000515527 PSMC6P62333 389 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 SMAD4Q13485 552 aaKnown RBP16.37■□□□□ 0.21
SMAD1-216ENST00000515527 RASGRF1Q13972 1273 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 COL19A1Q14993 1142 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 RABL6Q3YEC7 729 aaPredicted RBP16.37■□□□□ 0.21
SMAD1-216ENST00000515527 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
SMAD1-216ENST00000515527 ATG4CQ96DT6 458 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 CHAMP1Q96JM3 812 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 C17orf80Q9BSJ5 609 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
SMAD1-216ENST00000515527 NSUN3Q9H649 340 aaKnown RBP16.37■□□□□ 0.21
SMAD1-216ENST00000515527 TNKSO95271 1327 aa16.37■□□□□ 0.21
SMAD1-216ENST00000515527 EYA2O00167 538 aa16.36■□□□□ 0.21
SMAD1-216ENST00000515527 FLOT1O75955 427 aa16.36■□□□□ 0.21
SMAD1-216ENST00000515527 PDGFBP01127 241 aaPredicted RBP16.36■□□□□ 0.21
SMAD1-216ENST00000515527 NBPF7P0C2Y1 421 aaPredicted RBP16.36■□□□□ 0.21
SMAD1-216ENST00000515527 KCNG4Q8TDN1 519 aa16.36■□□□□ 0.21
SMAD1-216ENST00000515527 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
SMAD1-216ENST00000515527 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
SMAD1-216ENST00000515527 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
SMAD1-216ENST00000515527 GPR179Q6PRD1 2367 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 NCK2O43639 380 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 ALDH1L1O75891 902 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 DEFB103AP81534 67 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 TMEM132BQ14DG7 1078 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMAD1-216ENST00000515527 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 RETREG2Q8NC44 543 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 TANC1Q9C0D5 1861 aa16.35■□□□□ 0.21
SMAD1-216ENST00000515527 ZEB2O60315 1214 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 GJB5O95377 273 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 HOXB3P14651 431 aaPredicted RBP16.34■□□□□ 0.21
SMAD1-216ENST00000515527 DLX2Q07687 328 aaPredicted RBP16.34■□□□□ 0.21
SMAD1-216ENST00000515527 ABCB5Q2M3G0 1257 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 FAM117BQ6P1L5 589 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 MAMDC4Q6UXC1 1216 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 NSUN4Q96CB9 384 aaKnown RBP16.34■□□□□ 0.21
SMAD1-216ENST00000515527 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 ABHD16BQ9H3Z7 469 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 CABP5Q9NP86 173 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.34■□□□□ 0.21
SMAD1-216ENST00000515527 DLL3Q9NYJ7 618 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 FLT1P17948 1338 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 FRYLO94915 3013 aa16.34■□□□□ 0.21
SMAD1-216ENST00000515527 IQCF3P0C7M6 154 aa16.33■□□□□ 0.2
SMAD1-216ENST00000515527 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
SMAD1-216ENST00000515527 RIOX2Q8IUF8 465 aa16.33■□□□□ 0.2
SMAD1-216ENST00000515527 DDX11Q96FC9 970 aa16.33■□□□□ 0.2
SMAD1-216ENST00000515527 RIPOR3Q96MK2 946 aa16.33■□□□□ 0.2
SMAD1-216ENST00000515527 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
SMAD1-216ENST00000515527 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
SMAD1-216ENST00000515527 CD207Q9UJ71 328 aa16.33■□□□□ 0.2
SMAD1-216ENST00000515527 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
SMAD1-216ENST00000515527 LOC730098B7Z3J9 87 aa16.32■□□□□ 0.2
SMAD1-216ENST00000515527 ADORA1P30542 326 aa16.32■□□□□ 0.2
SMAD1-216ENST00000515527 NKX3-2P78367 333 aa16.32■□□□□ 0.2
SMAD1-216ENST00000515527 CERKLQ49MI3 558 aaPredicted RBP16.32■□□□□ 0.2
SMAD1-216ENST00000515527 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
SMAD1-216ENST00000515527 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMAD1-216ENST00000515527 GPM6BQ13491 265 aa16.31■□□□□ 0.2
SMAD1-216ENST00000515527 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
SMAD1-216ENST00000515527 AP5M1Q9H0R1 490 aa16.31■□□□□ 0.2
SMAD1-216ENST00000515527 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
SMAD1-216ENST00000515527 ASTN1O14525 1302 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 BAG3O95817 575 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 PLCG2P16885 1265 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 STAT3P40763 770 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms