RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 C11orf49Q9H6J7 331 aa16.34■□□□□ 0.21
ITGA3-214ENST00000514834 RANBP2P49792 3224 aaKnown RBP16.33■□□□□ 0.21
ITGA3-214ENST00000514834 SGSM2O43147 1006 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 SNAI1O95863 264 aaPredicted RBP16.33■□□□□ 0.2
ITGA3-214ENST00000514834 OAZ1P54368 228 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 CNTN2Q02246 1040 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 MUM1L1Q5H9M0 696 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.33■□□□□ 0.2
ITGA3-214ENST00000514834 TTC14Q96N46 770 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 CPVLQ9H3G5 476 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.2
ITGA3-214ENST00000514834 COLQQ9Y215 455 aaPredicted RBP16.33■□□□□ 0.2
ITGA3-214ENST00000514834 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.2
ITGA3-214ENST00000514834 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.2
ITGA3-214ENST00000514834 SEPT4O43236 478 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 EVI5O60447 810 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 CYP21A2P08686 494 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 ZNF865P0CJ78 1059 aaPredicted RBP16.32■□□□□ 0.2
ITGA3-214ENST00000514834 GOLGA8HP0CJ92 632 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 FDX1P10109 184 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 ALAS1P13196 640 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 ZNF543Q08ER8 600 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
ITGA3-214ENST00000514834 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 ANKRD35Q8N283 1001 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
ITGA3-214ENST00000514834 CHST13Q8NET6 341 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 RAD50Q92878 1312 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 LENG1Q96BZ8 264 aaPredicted RBP16.32■□□□□ 0.2
ITGA3-214ENST00000514834 TRERF1Q96PN7 1200 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 RNF146Q9NTX7 359 aa16.32■□□□□ 0.2
ITGA3-214ENST00000514834 LRRC26Q2I0M4 334 aa16.31■□□□□ 0.2
ITGA3-214ENST00000514834 DGKHQ86XP1 1220 aa16.31■□□□□ 0.2
ITGA3-214ENST00000514834 C7orf61Q8IZ16 206 aa16.31■□□□□ 0.2
ITGA3-214ENST00000514834 RUFY2Q8WXA3 655 aa16.31■□□□□ 0.2
ITGA3-214ENST00000514834 ANKS1AQ92625 1134 aa16.31■□□□□ 0.2
ITGA3-214ENST00000514834 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
ITGA3-214ENST00000514834 ZSCAN10Q96SZ4 725 aaPredicted RBP16.31■□□□□ 0.2
ITGA3-214ENST00000514834 RANBP17Q9H2T7 1088 aaKnown RBP16.31■□□□□ 0.2
ITGA3-214ENST00000514834 A1CFQ9NQ94 594 aaKnown RBP16.31■□□□□ 0.2
ITGA3-214ENST00000514834 LCTP09848 1927 aa16.31■□□□□ 0.2
ITGA3-214ENST00000514834 ASTN1O14525 1302 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 SOWAHBA6NEL2 793 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 MSCO60682 206 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 HABP4Q5JVS0 413 aaKnown RBP16.3■□□□□ 0.2
ITGA3-214ENST00000514834 STOX1Q6ZVD7 989 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 PNMA1Q8ND90 353 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 ACAD9Q9H845 621 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 FBXO40Q9UH90 709 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 CCPG1Q9ULG6 757 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
ITGA3-214ENST00000514834 TNKSO95271 1327 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 ADCY6O43306 1168 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
ITGA3-214ENST00000514834 ICAM1P05362 532 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
ITGA3-214ENST00000514834 COL9A3Q14050 684 aaPredicted RBP16.29■□□□□ 0.2
ITGA3-214ENST00000514834 MAMDC4Q6UXC1 1216 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 CHRDL2Q6WN34 429 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 KRT23Q9C075 422 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 SENP6Q9GZR1 1112 aaPredicted RBP16.29■□□□□ 0.2
ITGA3-214ENST00000514834 SENP2Q9HC62 589 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
ITGA3-214ENST00000514834 NR2E3Q9Y5X4 410 aa16.29■□□□□ 0.2
ITGA3-214ENST00000514834 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 NFIBO00712 420 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 PGK1P00558 417 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 SYN1P17600 705 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 LRRC41Q15345 812 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 SEC23AQ15436 765 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 MAP4K1Q92918 833 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
ITGA3-214ENST00000514834 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.28■□□□□ 0.2
ITGA3-214ENST00000514834 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
ITGA3-214ENST00000514834 SYNGAP1Q96PV0 1343 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 E7EWF7 191 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 DNM1LO00429 736 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 ATN1P54259 1190 aaPredicted RBP16.27■□□□□ 0.2
ITGA3-214ENST00000514834 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 NSMFQ6X4W1 530 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 ARMCX2Q7L311 632 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 CHST3Q7LGC8 479 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 ZNF467Q7Z7K2 595 aaPredicted RBP16.27■□□□□ 0.2
ITGA3-214ENST00000514834 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 CLEC4DQ8WXI8 215 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 LSG1Q9H089 658 aaKnown RBP16.27■□□□□ 0.2
ITGA3-214ENST00000514834 PRO3102Q9H379 93 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 CYP39A1Q9NYL5 469 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 RBM27Q9P2N5 1060 aaKnown RBP16.27■□□□□ 0.2
ITGA3-214ENST00000514834 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms