RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 THEMIS2Q5TEJ8 643 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 APOA5Q6Q788 366 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ARHGAP27Q6ZUM4 889 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 MAGEB6Q8N7X4 407 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 MORC4Q8TE76 937 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 C8orf76Q96K31 380 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 CABS1Q96KC9 395 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 AIFM3Q96NN9 605 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 PARD6BQ9BYG5 372 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 CD248Q9HCU0 757 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ATP8A1Q9Y2Q0 1164 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.36□□□□□ -1.073e-6■■□□□ 11.9
PDLIM5-219ENST00000514743 LY75O60449 1722 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 CCDC88AQ3V6T2 1871 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 TNRC6CQ9HCJ0 1690 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 LRRC10BA6NIK2 292 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 GSG1L2A8MUP6 293 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 OPA1O60313 960 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 RANBP6O60518 1105 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 IFNL3Q8IZI9 196 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 TCP11Q8WWU5 503 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 NHSQ6T4R5 1651 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 KCNQ2O43526 872 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 WDHD1O75717 1129 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 MBD4O95243 580 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 RXRAP19793 462 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 ZNF165P49910 485 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 BCAMP50895 628 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 PTK7Q13308 1070 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 TMED1Q13445 227 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 SMC1AQ14683 1233 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 PARP10Q53GL7 1025 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 CEP135Q66GS9 1140 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 CDCA2Q69YH5 1023 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 ADALQ6DHV7 355 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 SGMS1Q86VZ5 419 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 KCNN1Q92952 543 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 BHMTQ93088 406 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 SLC7A5P2Q9GIP4 190 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 PNPLA7Q6ZV29 1317 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 A0A1W2PQ27 194 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 A0A1W2PQ64 194 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 A0A1W2PQD8 194 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 UBE2Q2LH0YL09 131 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 BOLA2-SMG1P6H3BVE0 249 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 PRKAB2O43741 272 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 Q4G0T1 1027 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 CCDC92Q53HC0 331 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 ADGRA1Q86SQ6 560 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 LCORLQ8N3X6 602 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 USP33Q8TEY7 942 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 SEZ6LQ9BYH1 1024 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 TRIM5Q9C035 493 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 ARMT1Q9H993 441 aa8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 DNAAF2Q9NVR5 837 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 TRMT1Q9NXH9 659 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
PDLIM5-219ENST00000514743 MROH7-TTC4A0A0A0MT08 1334 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 ZNF804BA4D1E1 1349 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 WTIPA6NIX2 430 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 EIF3FO00303 357 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 YEATS4O95619 227 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 POLR3DP05423 398 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 ME1P48163 572 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 ZNF75DP51815 510 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 NDUFA8P51970 172 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 CHRNDQ07001 517 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 TPD52L1Q16890 204 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 DHX40Q8IX18 779 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 CEP57L1Q8IYX8 460 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 FSIP1Q8NA03 581 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 MPHOSPH8Q99549 860 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 GOLGA6L10A6NI86 522 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 RPS6KA5O75582 802 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 SLU7O95391 586 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 METAP2P50579 478 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 CLCN2P51788 898 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 BRAPQ7Z569 592 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 MYO1HQ8N1T3 1032 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 CTNNBL1Q8WYA6 563 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 MRPS27Q92552 414 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 TMEM87BQ96K49 555 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 THSD7AQ9UPZ6 1657 aa8.34□□□□□ -1.07
PDLIM5-219ENST00000514743 A0A1B0GVL5 298 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 ERLIN1O75477 346 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 HOXA10P31260 410 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC30A9Q6PML9 568 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 RNF168Q8IYW5 571 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC43A3Q8NBI5 491 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms