RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 GTF2A2P52657 109 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 DYNLL1P63167 89 aaKnown RBP8.28□□□□□ -1.08
CCDC30-214ENST00000514642 CGNQ9P2M7 1197 aaKnown RBP8.28□□□□□ -1.08
CCDC30-214ENST00000514642 ANKFY1Q9P2R3 1169 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 PCDHA12Q9UN75 941 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 TNKSO95271 1327 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 PNMA6EA0A0J9YXQ4 647 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 POSTNQ15063 836 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 PDZD4Q76G19 769 aaPredicted RBP8.28□□□□□ -1.08
CCDC30-214ENST00000514642 DAAM2Q86T65 1068 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 PUS3Q9BZE2 481 aaKnown RBP8.28□□□□□ -1.08
CCDC30-214ENST00000514642 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 ZNF233A6NK53 670 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 TTC30AQ86WT1 665 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 SMC1BQ8NDV3 1235 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 CACYBPQ9HB71 228 aaKnown RBP8.28□□□□□ -1.08
CCDC30-214ENST00000514642 CD209Q9NNX6 404 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.08
CCDC30-214ENST00000514642 SPATA31E1Q6ZUB1 1445 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 CDHR2Q9BYE9 1310 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 CYP27B1O15528 508 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 ADORA1P30542 326 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 CUL4BQ13620 913 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 PTPN14Q15678 1187 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 ZNF449Q6P9G9 518 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 DCUN1D2Q6PH85 259 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 COPRSQ9NQ92 184 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 TPCN1Q9ULQ1 816 aa8.28□□□□□ -1.08
CCDC30-214ENST00000514642 RPAP1Q9BWH6 1393 aaPredicted RBP8.28□□□□□ -1.08
CCDC30-214ENST00000514642 ZMYM6O95789 1325 aa8.27□□□□□ -1.08
CCDC30-214ENST00000514642 A0A1W2PRG0 241 aa8.27□□□□□ -1.08
CCDC30-214ENST00000514642 HSPD1P10809 573 aaKnown RBP8.27□□□□□ -1.08
CCDC30-214ENST00000514642 SCG2P13521 617 aa8.27□□□□□ -1.08
CCDC30-214ENST00000514642 ARMCX5Q6P1M9 558 aa8.27□□□□□ -1.08
CCDC30-214ENST00000514642 DPF3Q92784 378 aa8.27□□□□□ -1.08
CCDC30-214ENST00000514642 TRERF1Q96PN7 1200 aa8.27□□□□□ -1.08
CCDC30-214ENST00000514642 CDC42BPBQ9Y5S2 1711 aa8.27□□□□□ -1.08
CCDC30-214ENST00000514642 MCM4P33991 863 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 PROSER3Q2NL68 480 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
CCDC30-214ENST00000514642 KATNAL1Q9BW62 490 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 TBC1D7Q9P0N9 293 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 UNC13BO14795 1591 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 CCDC175P0C221 793 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 DYMQ7RTS9 669 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 GANCQ8TET4 914 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 VPS54Q9P1Q0 977 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 PCDHB15Q9Y5E8 787 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 NDUFB9Q9Y6M9 179 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 PIK3CAP42336 1068 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 MMP14P50281 582 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 HLFQ16534 295 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 ANO1Q5XXA6 986 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 RSBN1LQ6PCB5 846 aaPredicted RBP8.27□□□□□ -1.09
CCDC30-214ENST00000514642 CCDC63Q8NA47 563 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 FRMPD1Q5SYB0 1578 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 INO80B-WBP1J3KQ70 363 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 GH2P01242 217 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 KCNA4P22459 653 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 SNRNP48Q6IEG0 339 aaKnown RBP8.27□□□□□ -1.09
CCDC30-214ENST00000514642 ABCB11O95342 1321 aa8.27□□□□□ -1.09
CCDC30-214ENST00000514642 PFDN6O15212 129 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 DEFB132Q7Z7B7 95 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 BBS5Q8N3I7 341 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 CCDC42Q96M95 316 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 ADARB2Q9NS39 739 aaKnown RBP8.26□□□□□ -1.09
CCDC30-214ENST00000514642 MINPP1Q9UNW1 487 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 STAM2O75886 525 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 ALDH1A1P00352 501 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 CDK8P49336 464 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 GOLGA8FQ08AF8 430 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 GOLGA8DPQ0D2H9 430 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 CDC37Q16543 378 aaPredicted RBP8.26□□□□□ -1.09
CCDC30-214ENST00000514642 KCNV1Q6PIU1 500 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 TRIM50Q86XT4 487 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 GRPEL1Q9HAV7 217 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 LMCD1Q9NZU5 365 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC30-214ENST00000514642 DCCP43146 1447 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 CNTNAP4Q9C0A0 1308 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 EPHX2P34913 555 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 SPECC1Q5M775 1068 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 C19orf81C9J6K1 198 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 OR52Z1P0C646 297 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 ZNF165P49910 485 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 GMPSP49915 693 aaPredicted RBP8.26□□□□□ -1.09
CCDC30-214ENST00000514642 JAK3P52333 1124 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 MYO1EQ12965 1108 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 STRIP1Q5VSL9 837 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 C1orf112Q9NSG2 853 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 POLIQ9UNA4 740 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 COL4A3BPQ9Y5P4 624 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 CCL15-CCL14A0A0B4J2E2 113 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 CAPN15O75808 1086 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 VIMP08670 466 aaKnown RBP8.26□□□□□ -1.09
CCDC30-214ENST00000514642 PPP1R7Q15435 360 aa8.26□□□□□ -1.09
CCDC30-214ENST00000514642 SURF1Q15526 300 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms