RNA–Protein interactions for RNA: ENST00000514636.1

LEMD2-213, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-213ENST00000514636 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
LEMD2-213ENST00000514636 GOPCQ9HD26 462 aa17.67■□□□□ 0.42
LEMD2-213ENST00000514636 PRR33A8MZF0 331 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 GTPBP6O43824 516 aaPredicted RBP17.66■□□□□ 0.42
LEMD2-213ENST00000514636 CDK8P49336 464 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 ITGA7Q13683 1181 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 TTF1Q15361 905 aaPredicted RBP17.66■□□□□ 0.42
LEMD2-213ENST00000514636 FAM83BQ5T0W9 1011 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 C12orf60Q5U649 245 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 SNRNP48Q6IEG0 339 aaKnown RBP17.66■□□□□ 0.42
LEMD2-213ENST00000514636 ARMCX2Q7L311 632 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 MICALL1Q8N3F8 863 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 LCORLQ8N3X6 602 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 HLA-CQ95604 372 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 VTI1AQ96AJ9 217 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 SLF1Q9BQI6 1058 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.66■□□□□ 0.42
LEMD2-213ENST00000514636 CD320Q9NPF0 282 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 ATP8A2Q9NTI2 1148 aa17.66■□□□□ 0.42
LEMD2-213ENST00000514636 USP34Q70CQ2 3546 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 TRIOO75962 3097 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 B4GALT4O60513 344 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 CA3P07451 260 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 CCL23P55773 120 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
LEMD2-213ENST00000514636 TMEM67Q5HYA8 995 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 SLC9C2Q5TAH2 1124 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 CXCL17Q6UXB2 119 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 ALYREFQ86V81 257 aaKnown RBP17.65■□□□□ 0.42
LEMD2-213ENST00000514636 TNNQ9UQP3 1299 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 ZBED9Q6R2W3 1325 aa17.65■□□□□ 0.42
LEMD2-213ENST00000514636 SMIM22K7EJ46 135 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 RFXAPO00287 272 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
LEMD2-213ENST00000514636 LPXNO60711 386 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 TAP1Q03518 808 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 TTLL4Q14679 1199 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 PRPF38AQ8NAV1 312 aaKnown RBP17.64■□□□□ 0.41
LEMD2-213ENST00000514636 PHOSPHO2Q8TCD6 241 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 TRPV6Q9H1D0 765 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 FBXO40Q9UH90 709 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 ZNF532Q9HCE3 1301 aa17.64■□□□□ 0.41
LEMD2-213ENST00000514636 ARHGEF15O94989 841 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 OAZ1P54368 228 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 BEX3Q00994 111 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 SKIV2LQ15477 1246 aaKnown RBP17.63■□□□□ 0.41
LEMD2-213ENST00000514636 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
LEMD2-213ENST00000514636 FAM133AQ8N9E0 248 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 CHST13Q8NET6 341 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.63■□□□□ 0.41
LEMD2-213ENST00000514636 SLC38A10Q9HBR0 1119 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 LMCD1Q9NZU5 365 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 Q9Y3F1 56 aa17.63■□□□□ 0.41
LEMD2-213ENST00000514636 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.62■□□□□ 0.41
LEMD2-213ENST00000514636 FAM86C2PA6NEL3 165 aa17.62■□□□□ 0.41
LEMD2-213ENST00000514636 TNFAIP2Q03169 654 aa17.62■□□□□ 0.41
LEMD2-213ENST00000514636 FSCN1Q16658 493 aaKnown RBP17.62■□□□□ 0.41
LEMD2-213ENST00000514636 KRT40Q6A162 431 aa17.62■□□□□ 0.41
LEMD2-213ENST00000514636 SLC9A7Q96T83 725 aa17.62■□□□□ 0.41
LEMD2-213ENST00000514636 ALDH8A1Q9H2A2 487 aaPredicted RBP17.62■□□□□ 0.41
LEMD2-213ENST00000514636 BAZ2AQ9UIF9 1905 aaKnown RBP17.61■□□□□ 0.41
LEMD2-213ENST00000514636 BCAR3O75815 825 aa17.61■□□□□ 0.41
LEMD2-213ENST00000514636 TLK2Q86UE8 772 aa17.61■□□□□ 0.41
LEMD2-213ENST00000514636 SCLYQ96I15 445 aa17.61■□□□□ 0.41
LEMD2-213ENST00000514636 SNX27Q96L92 541 aa17.61■□□□□ 0.41
LEMD2-213ENST00000514636 KCNH6Q9H252 994 aa17.61■□□□□ 0.41
LEMD2-213ENST00000514636 NYAP2Q9P242 653 aa17.61■□□□□ 0.41
LEMD2-213ENST00000514636 ZNF318Q5VUA4 2279 aa17.61■□□□□ 0.41
LEMD2-213ENST00000514636 PRKAB2O43741 272 aa17.6■□□□□ 0.41
LEMD2-213ENST00000514636 RFC2P35250 354 aa17.6■□□□□ 0.41
LEMD2-213ENST00000514636 MRE11P49959 708 aa17.6■□□□□ 0.41
LEMD2-213ENST00000514636 GRB10Q13322 594 aa17.6■□□□□ 0.41
LEMD2-213ENST00000514636 ANKRD35Q8N283 1001 aa17.6■□□□□ 0.41
LEMD2-213ENST00000514636 ARMT1Q9H993 441 aa17.6■□□□□ 0.41
LEMD2-213ENST00000514636 SYNPO2Q9UMS6 1093 aa17.6■□□□□ 0.41
LEMD2-213ENST00000514636 COL4A4P53420 1690 aaPredicted RBP17.59■□□□□ 0.41
LEMD2-213ENST00000514636 CYP2D7A0A087X1C5 515 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.59■□□□□ 0.41
LEMD2-213ENST00000514636 ZBBXA8MT70 800 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 USP17L12C9JPN9 530 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 USP17L21D6R901 530 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 F5H6K3 240 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 NDUFB10O96000 172 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 KLRC3Q07444 240 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 FAM178BQ8IXR5 827 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
LEMD2-213ENST00000514636 CFAP54Q96N23 3096 aa17.59■□□□□ 0.41
LEMD2-213ENST00000514636 IGKV6D-41A0A0C4DH26 115 aa17.58■□□□□ 0.4
LEMD2-213ENST00000514636 SUPT20HL2P0C7V6 817 aa17.58■□□□□ 0.4
LEMD2-213ENST00000514636 SMPD1P17405 629 aa17.58■□□□□ 0.4
LEMD2-213ENST00000514636 CNTN2Q02246 1040 aa17.58■□□□□ 0.4
LEMD2-213ENST00000514636 TAPT1Q6NXT6 567 aa17.58■□□□□ 0.4
LEMD2-213ENST00000514636 HERC6Q8IVU3 1022 aa17.58■□□□□ 0.4
LEMD2-213ENST00000514636 MORC4Q8TE76 937 aa17.58■□□□□ 0.4
LEMD2-213ENST00000514636 SCN10AQ9Y5Y9 1956 aa17.57■□□□□ 0.4
LEMD2-213ENST00000514636 TANC1Q9C0D5 1861 aa17.57■□□□□ 0.4
LEMD2-213ENST00000514636 SOWAHBA6NEL2 793 aa17.57■□□□□ 0.4
LEMD2-213ENST00000514636 ASB14A6NK59 587 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms