RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 TMC3Q7Z5M5 1100 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 DTWD2Q8NBA8 298 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 ATL2Q8NHH9 583 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 FBLIM1Q8WUP2 373 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 LEO1Q8WVC0 666 aaPredicted RBP7.04□□□□□ -1.28
RFC1-216ENST00000514572 COPS5Q92905 334 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 COX4I2Q96KJ9 171 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 MCMBPQ9BTE3 642 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 FBXL21Q9UKT6 434 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 MKL2Q9ULH7 1088 aa7.04□□□□□ -1.28
RFC1-216ENST00000514572 CCDC194A0A1B0GVG4 234 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 PIK3R2O00459 728 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 APBA3O96018 575 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 SNRPB2P08579 225 aaKnown RBP7.03□□□□□ -1.28
RFC1-216ENST00000514572 CPEP16870 476 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 KCNA6P17658 529 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 CTSKP43235 329 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 MCL1Q07820 350 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 PPP2R5DQ14738 602 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 STAT4Q14765 748 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 GRIK4Q16099 956 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 PRRT3Q5FWE3 981 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 C22orf34Q6ZV56 151 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 NPLOC4Q8TAT6 608 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 RELTQ969Z4 430 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 C8orf48Q96LL4 319 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 DUSP23Q9BVJ7 150 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 GPR55Q9Y2T6 319 aaPredicted RBP7.03□□□□□ -1.28
RFC1-216ENST00000514572 SF3B6Q9Y3B4 125 aaKnown RBP7.03□□□□□ -1.28
RFC1-216ENST00000514572 NPFFR2Q9Y5X5 522 aa7.03□□□□□ -1.28
RFC1-216ENST00000514572 H0Y8X5 98 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 GAS2O43903 313 aaKnown RBP7.02□□□□□ -1.29
RFC1-216ENST00000514572 OPA1O60313 960 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 BRINP1O60477 761 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 KATNA1O75449 491 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 PRAMEF1O95521 474 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 CRTAMO95727 393 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 JMJD7P0C870 316 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 NOS3P29474 1203 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 USP11P51784 963 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 TBX4P57082 545 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 AMPD2Q01433 879 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 STRN3Q13033 797 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 CDK5R2Q13319 367 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 MTMR1Q13613 665 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 ACBD5Q5T8D3 534 aaPredicted RBP7.02□□□□□ -1.29
RFC1-216ENST00000514572 RNF219Q5W0B1 726 aaPredicted RBP7.02□□□□□ -1.29
RFC1-216ENST00000514572 ZCCHC8Q6NZY4 707 aaKnown RBP7.02□□□□□ -1.29
RFC1-216ENST00000514572 ABHD17CQ6PCB6 329 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 DZIP1LQ8IYY4 767 aaKnown RBP7.02□□□□□ -1.29
RFC1-216ENST00000514572 DCAF4Q8WV16 495 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 MYRFLQ96LU7 910 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 MAGEB10Q96LZ2 347 aaPredicted RBP7.02□□□□□ -1.29
RFC1-216ENST00000514572 ZDHHC15Q96MV8 337 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 YIPF2Q9BWQ6 316 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 NOP53Q9NZM5 478 aaKnown RBP7.02□□□□□ -1.29
RFC1-216ENST00000514572 TRAF6Q9Y4K3 522 aa7.02□□□□□ -1.29
RFC1-216ENST00000514572 ABCC9O60706 1549 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 ARNTLO00327 626 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 KPNA6O60684 536 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 GLB1P16278 677 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 ITIH2P19823 946 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 SCRN1Q12765 414 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 RSPO2Q6UXX9 243 aaPredicted RBP7.01□□□□□ -1.29
RFC1-216ENST00000514572 ARMC10Q8N2F6 343 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 TOP6BLQ8N6T0 577 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 FRS2Q8WU20 508 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 HDAC8Q9BY41 377 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 CHST7Q9NS84 486 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 ST14Q9Y5Y6 855 aa7.01□□□□□ -1.29
RFC1-216ENST00000514572 B4E1Z4 1266 aa7□□□□□ -1.29
RFC1-216ENST00000514572 ARVCFO00192 962 aa7□□□□□ -1.29
RFC1-216ENST00000514572 AQP7O14520 342 aa7□□□□□ -1.29
RFC1-216ENST00000514572 SART1O43290 800 aaKnown RBP7□□□□□ -1.29
RFC1-216ENST00000514572 TSPAN6O43657 245 aa7□□□□□ -1.29
RFC1-216ENST00000514572 VAMP4O75379 141 aa7□□□□□ -1.29
RFC1-216ENST00000514572 THBDP07204 575 aa7□□□□□ -1.29
RFC1-216ENST00000514572 ZNF865P0CJ78 1059 aaPredicted RBP7□□□□□ -1.29
RFC1-216ENST00000514572 CYP7A1P22680 504 aa7□□□□□ -1.29
RFC1-216ENST00000514572 KIR3DL1P43629 444 aa7□□□□□ -1.29
RFC1-216ENST00000514572 KCNJ6P48051 423 aa7□□□□□ -1.29
RFC1-216ENST00000514572 NEK4P51957 841 aa7□□□□□ -1.29
RFC1-216ENST00000514572 NMIQ13287 307 aaPredicted RBP7□□□□□ -1.29
RFC1-216ENST00000514572 CDCA2Q69YH5 1023 aaPredicted RBP7□□□□□ -1.29
RFC1-216ENST00000514572 USP53Q70EK8 1073 aa7□□□□□ -1.29
RFC1-216ENST00000514572 SPATS2Q86XZ4 545 aaKnown RBP7□□□□□ -1.29
RFC1-216ENST00000514572 KIF18BQ86Y91 864 aa7□□□□□ -1.29
RFC1-216ENST00000514572 FAM20CQ8IXL6 584 aa7□□□□□ -1.29
RFC1-216ENST00000514572 GATA6Q92908 595 aa7□□□□□ -1.29
RFC1-216ENST00000514572 SCARF2Q96GP6 870 aaPredicted RBP7□□□□□ -1.29
RFC1-216ENST00000514572 ZFYVE21Q9BQ24 234 aa7□□□□□ -1.29
RFC1-216ENST00000514572 TRIM8Q9BZR9 551 aa7□□□□□ -1.29
RFC1-216ENST00000514572 CRTAC1Q9NQ79 661 aa7□□□□□ -1.29
RFC1-216ENST00000514572 GEMIN8Q9NWZ8 242 aaKnown RBP7□□□□□ -1.29
RFC1-216ENST00000514572 SLC5A4Q9NY91 659 aa7□□□□□ -1.29
RFC1-216ENST00000514572 MINPP1Q9UNW1 487 aa7□□□□□ -1.29
RFC1-216ENST00000514572 SHISA3A0PJX4 238 aa6.99□□□□□ -1.29
RFC1-216ENST00000514572 NEMP1O14524 444 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms