RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ACTN1P12814 892 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 HOXB3P14651 431 aaPredicted RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 PTGS1P23219 599 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 PSMC6P62333 389 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 ITGA7Q13683 1181 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 ST3GAL2Q16842 350 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 PUS10Q3MIT2 529 aaKnown RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 MAPKAPK5Q8IW41 473 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 KIAA2013Q8IYS2 634 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 ZGPATQ8N5A5 531 aaKnown RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 ZNF384Q8TF68 577 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 PPP1R13LQ8WUF5 828 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 SIL1Q9H173 461 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 IRF2BPLQ9H1B7 796 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 SAP30BPQ9UHR5 308 aaKnown RBP4.04□□□□□ -1.76
CHD1-211ENST00000514344 DENND2AQ9ULE3 1009 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 FAM184BQ9ULE4 1060 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 ZNF236Q9UL36 1845 aa4.04□□□□□ -1.76
CHD1-211ENST00000514344 UNC79Q9P2D8 2635 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 SALL1Q9NSC2 1324 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 SIPA1L1O43166 1804 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 DUSP11O75319 330 aaKnown RBP4.03□□□□□ -1.76
CHD1-211ENST00000514344 DLX2Q07687 328 aaPredicted RBP4.03□□□□□ -1.76
CHD1-211ENST00000514344 RASGRF1Q13972 1273 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 COG2Q14746 738 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 ACAP1Q15027 740 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 PKN1Q16512 942 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 SH3RF3Q8TEJ3 882 aaPredicted RBP4.03□□□□□ -1.76
CHD1-211ENST00000514344 TGFBRAP1Q8WUH2 860 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 C12orf42Q96LP6 360 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 AGBL1Q96MI9 1066 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 CRBNQ96SW2 442 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 MMP19Q99542 508 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 POP1Q99575 1024 aaKnown RBP4.03□□□□□ -1.76
CHD1-211ENST00000514344 MROH8Q9H579 483 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 TRMT13Q9NUP7 481 aaKnown RBP4.03□□□□□ -1.76
CHD1-211ENST00000514344 LMCD1Q9NZU5 365 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 KIF16BQ96L93 1317 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 STXBP3O00186 592 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 FLOT1O75955 427 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 KCNJ6P48051 423 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 SLC4A3P48751 1232 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 USP14P54578 494 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 ATP2B3Q16720 1220 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 CCDC144BQ3MJ40 725 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 TCEAL5Q5H9L2 206 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 TBC1D9Q6ZT07 1266 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 SPICE1Q8N0Z3 855 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 BANK1Q8NDB2 785 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 ATG4CQ96DT6 458 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 TGS1Q96RS0 853 aaKnown RBP4.03□□□□□ -1.76
CHD1-211ENST00000514344 C17orf80Q9BSJ5 609 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 AATFQ9NY61 560 aaKnown RBP eCLIP4.03□□□□□ -1.76
CHD1-211ENST00000514344 HOXC10Q9NYD6 342 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 NRBP1Q9UHY1 535 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 NBEAQ8NFP9 2946 aa4.03□□□□□ -1.76
CHD1-211ENST00000514344 MCM3APO60318 1980 aa4.03□□□□□ -1.77
CHD1-211ENST00000514344 GRIN2DO15399 1336 aa4.03□□□□□ -1.77
CHD1-211ENST00000514344 E9PSI1 815 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 APAF1O14727 1248 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 SNAI1O95863 264 aaPredicted RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 ADORA1P30542 326 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 NBL1P41271 181 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 DEFB103AP81534 67 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 ZXDAP98168 799 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 WDR43Q15061 677 aaKnown RBP eCLIP4.02□□□□□ -1.77
CHD1-211ENST00000514344 SMAD2Q15796 467 aaKnown RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 CCDC102BQ68D86 513 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 PI16Q6UXB8 463 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 ERICH6Q7L0X2 663 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 ABRAQ8N0Z2 381 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 PHOSPHO2Q8TCD6 241 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 KCNG4Q8TDN1 519 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 PABPC5Q96DU9 382 aaKnown RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 HINFPQ9BQA5 517 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 KIAA1683Q9H0B3 1180 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 DHX36Q9H2U1 1008 aaKnown RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 ADAMTS8Q9UP79 889 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 LAMA5O15230 3695 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 MAST4O15021 2626 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 ROBO3Q96MS0 1386 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 CELSR3Q9NYQ7 3312 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 GCN1Q92616 2671 aaKnown RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 LINC01553A4QN01 128 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 PFKMP08237 780 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 CST5P28325 142 aaPredicted RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 CCDC27Q2M243 656 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 ZNF792Q3KQV3 632 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 FBXO22Q8NEZ5 403 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 RAI14Q9P0K7 980 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 PTPRSQ13332 1948 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 FLT1P17948 1338 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 SEMA3EO15041 775 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 MBTPS2O43462 519 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 LTBRP36941 435 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 CALD1Q05682 793 aaKnown RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 SIGLEC14Q08ET2 396 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 ACVR2BQ13705 512 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 PUM1Q14671 1186 aaKnown RBP eCLIP4.02□□□□□ -1.772e-7■□□□□ 11.3
Retrieved 100 of 20,778 RNA–protein pairs in 258.2 ms