RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 NUP88Q99567 741 aaPredicted RBP11.77□□□□□ -0.53
NEDD9-214ENST00000513989 SLF1Q9BQI6 1058 aa11.77□□□□□ -0.53
NEDD9-214ENST00000513989 LLPHQ9BRT6 129 aaKnown RBP11.77□□□□□ -0.53
NEDD9-214ENST00000513989 VAT1LQ9HCJ6 419 aa11.77□□□□□ -0.53
NEDD9-214ENST00000513989 SEC63Q9UGP8 760 aaKnown RBP11.77□□□□□ -0.53
NEDD9-214ENST00000513989 KIF3AQ9Y496 699 aa11.77□□□□□ -0.53
NEDD9-214ENST00000513989 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
NEDD9-214ENST00000513989 FRMPD2Q68DX3 1309 aaPredicted RBP11.77□□□□□ -0.53
NEDD9-214ENST00000513989 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 PDHXO00330 501 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 SCRN1Q12765 414 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 KIAA1755Q5JYT7 1200 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 GPAT2Q6NUI2 795 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
NEDD9-214ENST00000513989 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 NECAB1Q8N987 351 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 SH3TC2Q8TF17 1288 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 WASF1Q92558 559 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 KIFC2Q96AC6 838 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 PARK7Q99497 189 aaKnown RBP11.76□□□□□ -0.53
NEDD9-214ENST00000513989 UBA5Q9GZZ9 404 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 TSHZ2Q9NRE2 1034 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 MYPNQ86TC9 1320 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 LAMA3Q16787 3333 aa11.76□□□□□ -0.53
NEDD9-214ENST00000513989 IFNAR1P17181 557 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 DSG3P32926 999 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 SLC16A2P36021 539 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 HMGN5P82970 282 aaKnown RBP11.75□□□□□ -0.53
NEDD9-214ENST00000513989 SLC9C1Q4G0N8 1177 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 TREML2Q5T2D2 321 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 TTBK2Q6IQ55 1244 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 ADGRF4Q8IZF3 695 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 STAG2Q8N3U4 1231 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
NEDD9-214ENST00000513989 TRIM47Q96LD4 638 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 SPZ1Q9BXG8 430 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 ASCC2Q9H1I8 757 aaPredicted RBP11.75□□□□□ -0.53
NEDD9-214ENST00000513989 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
NEDD9-214ENST00000513989 PPP1R9AQ9ULJ8 1098 aa11.75□□□□□ -0.53
NEDD9-214ENST00000513989 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
NEDD9-214ENST00000513989 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 PRPF3O43395 683 aaKnown RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 CD2BP2O95400 341 aaKnown RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 BCRP11274 1271 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 XBP1P17861 261 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 CDC27P30260 824 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 GCLCP48506 637 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 SRBD1Q8N5C6 995 aaKnown RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 FAM184AQ8NB25 1140 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 INTS4Q96HW7 963 aaKnown RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 SLC26A6Q9BXS9 759 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 RIOX1Q9H6W3 641 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 JMJD4Q9H9V9 463 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-214ENST00000513989 PRR12Q9ULL5 1215 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 SMC3Q9UQE7 1217 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
NEDD9-214ENST00000513989 VWA5AO00534 786 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 ZBTB5O15062 677 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 PLEKHA8P1O95397 391 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 FMNL1O95466 1100 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-214ENST00000513989 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-214ENST00000513989 CYP2C8P10632 490 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 OAZ1P54368 228 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 HERVK_113P62684 666 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 CUL4AQ13619 759 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 NID2Q14112 1375 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
NEDD9-214ENST00000513989 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-214ENST00000513989 RNF26Q9BY78 433 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-214ENST00000513989 FBXO28Q9NVF7 368 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 RABGAP1Q9Y3P9 1069 aa11.73□□□□□ -0.53
NEDD9-214ENST00000513989 DEXIO95424 95 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 GNRH1P01148 92 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 PDIA4P13667 645 aaKnown RBP11.72□□□□□ -0.53
NEDD9-214ENST00000513989 PSMC4P43686 418 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 CCNA1P78396 465 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 TRIM29Q14134 588 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 MTFR1Q15390 333 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 NTRK3Q16288 839 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 LBX2Q6XYB7 198 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 HOMER1Q86YM7 354 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
NEDD9-214ENST00000513989 GPRC5AQ8NFJ5 357 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 AMNQ9BXJ7 453 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 RANBP17Q9H2T7 1088 aaKnown RBP11.72□□□□□ -0.53
NEDD9-214ENST00000513989 SLC38A10Q9HBR0 1119 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 CWC22Q9HCG8 908 aaKnown RBP11.72□□□□□ -0.53
NEDD9-214ENST00000513989 ORC3Q9UBD5 711 aaPredicted RBP11.72□□□□□ -0.53
NEDD9-214ENST00000513989 SRRDQ9UH36 339 aa11.72□□□□□ -0.53
NEDD9-214ENST00000513989 ADAMTS5Q9UNA0 930 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms