RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 MCTP2Q6DN12 878 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 TGFBRAP1Q8WUH2 860 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 CABP5Q9NP86 173 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 CDK5RAP2Q96SN8 1893 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 FLT1P17948 1338 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 STXBP3O00186 592 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 NKX3-2P78367 333 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 BEX3Q00994 111 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 SIGLEC14Q08ET2 396 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 ST3GAL2Q16842 350 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 ABCB5Q2M3G0 1257 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 CCDC144BQ3MJ40 725 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 TATDN1Q6P1N9 297 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 MAMDC4Q6UXC1 1216 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 BANK1Q8NDB2 785 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 ATG4CQ96DT6 458 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 CRBNQ96SW2 442 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 CLDND1Q9NY35 253 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 RAI14Q9P0K7 980 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 TNKSO95271 1327 aa14.57□□□□□ -0.08
SFXN1-210ENST00000513725 SCN5AQ14524 2016 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 DMXL1Q9Y485 3027 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 CTAGE5O15320 804 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 ADCY6O43306 1168 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 FLOT1O75955 427 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 PUM1Q14671 1186 aaKnown RBP eCLIP14.56□□□□□ -0.08
SFXN1-210ENST00000513725 TMEM132BQ14DG7 1078 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 ATG9AQ7Z3C6 839 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 FBXO22Q8NEZ5 403 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 RAD9AQ99638 391 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 ABHD16BQ9H3Z7 469 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 SIP14410 1827 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 GRIN2DO15399 1336 aa14.56□□□□□ -0.08
SFXN1-210ENST00000513725 COL11A1P12107 1806 aaPredicted RBP14.55□□□□□ -0.08
SFXN1-210ENST00000513725 ZNF292O60281 2723 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 LINC01553A4QN01 128 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 NCK2O43639 380 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 ZEB2O60315 1214 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 ADORA1P30542 326 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 COPB2P35606 906 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 COL19A1Q14993 1142 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 RALBP1Q15311 655 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 CERKLQ49MI3 558 aaPredicted RBP14.55□□□□□ -0.08
SFXN1-210ENST00000513725 RIOX2Q8IUF8 465 aa14.55□□□□□ -0.08
SFXN1-210ENST00000513725 ALDH8A1Q9H2A2 487 aaPredicted RBP14.55□□□□□ -0.08
SFXN1-210ENST00000513725 AATFQ9NY61 560 aaKnown RBP eCLIP14.55□□□□□ -0.08
SFXN1-210ENST00000513725 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
SFXN1-210ENST00000513725 WDR87Q6ZQQ6 2873 aa14.54□□□□□ -0.08
SFXN1-210ENST00000513725 MBTPS2O43462 519 aa14.54□□□□□ -0.08
SFXN1-210ENST00000513725 CYP2C9P11712 490 aa14.54□□□□□ -0.08
SFXN1-210ENST00000513725 TCEAL5Q5H9L2 206 aa14.54□□□□□ -0.08
SFXN1-210ENST00000513725 FRMD5Q7Z6J6 570 aa14.54□□□□□ -0.08
SFXN1-210ENST00000513725 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
SFXN1-210ENST00000513725 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.54□□□□□ -0.08
SFXN1-210ENST00000513725 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
SFXN1-210ENST00000513725 IQCF3P0C7M6 154 aa14.53□□□□□ -0.08
SFXN1-210ENST00000513725 ACAP1Q15027 740 aa14.53□□□□□ -0.08
SFXN1-210ENST00000513725 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
SFXN1-210ENST00000513725 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
SFXN1-210ENST00000513725 ZNF467Q7Z7K2 595 aaPredicted RBP14.53□□□□□ -0.08
SFXN1-210ENST00000513725 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
SFXN1-210ENST00000513725 NSUN3Q9H649 340 aaKnown RBP14.53□□□□□ -0.08
SFXN1-210ENST00000513725 CIAO1O76071 339 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 GJB5O95377 273 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 STAT3P40763 770 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 RFX5P48382 616 aaPredicted RBP14.52□□□□□ -0.09
SFXN1-210ENST00000513725 WDR5P61964 334 aaKnown RBP14.52□□□□□ -0.09
SFXN1-210ENST00000513725 PSMC6P62333 389 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 SMAD4Q13485 552 aaKnown RBP14.52□□□□□ -0.09
SFXN1-210ENST00000513725 CLUL1Q15846 466 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 FSCN1Q16658 493 aaKnown RBP14.52□□□□□ -0.09
SFXN1-210ENST00000513725 TMCO2Q7Z6W1 182 aaPredicted RBP14.52□□□□□ -0.09
SFXN1-210ENST00000513725 RPAINQ86UA6 219 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 ASIC4Q96FT7 647 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 TRMT13Q9NUP7 481 aaKnown RBP14.52□□□□□ -0.09
SFXN1-210ENST00000513725 SERPINB13Q9UIV8 391 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 PTPRSQ13332 1948 aa14.52□□□□□ -0.09
SFXN1-210ENST00000513725 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
SFXN1-210ENST00000513725 LTBRP36941 435 aa14.51□□□□□ -0.09
SFXN1-210ENST00000513725 PPP4CP60510 307 aa14.51□□□□□ -0.09
SFXN1-210ENST00000513725 TBC1D9Q6ZT07 1266 aa14.51□□□□□ -0.09
SFXN1-210ENST00000513725 C17orf80Q9BSJ5 609 aa14.51□□□□□ -0.09
SFXN1-210ENST00000513725 AP5M1Q9H0R1 490 aa14.51□□□□□ -0.09
SFXN1-210ENST00000513725 LRP2BPQ9P2M1 347 aa14.51□□□□□ -0.09
SFXN1-210ENST00000513725 VAMP4O75379 141 aa14.5□□□□□ -0.09
SFXN1-210ENST00000513725 TNFAIP2Q03169 654 aa14.5□□□□□ -0.09
SFXN1-210ENST00000513725 MAGEB6Q8N7X4 407 aa14.5□□□□□ -0.09
SFXN1-210ENST00000513725 EHD4Q9H223 541 aa14.5□□□□□ -0.09
SFXN1-210ENST00000513725 FOCADQ5VW36 1801 aa14.5□□□□□ -0.09
SFXN1-210ENST00000513725 A0A1W2PRG0 241 aa14.49□□□□□ -0.09
SFXN1-210ENST00000513725 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
SFXN1-210ENST00000513725 DEFB103AP81534 67 aa14.49□□□□□ -0.09
SFXN1-210ENST00000513725 MVPQ14764 893 aaKnown RBP14.49□□□□□ -0.09
SFXN1-210ENST00000513725 SEPT2Q15019 361 aa14.49□□□□□ -0.09
SFXN1-210ENST00000513725 NAA16Q6N069 864 aaPredicted RBP14.49□□□□□ -0.09
SFXN1-210ENST00000513725 TLK2Q86UE8 772 aa14.49□□□□□ -0.09
SFXN1-210ENST00000513725 SPATA5Q8NB90 893 aa14.49□□□□□ -0.09
SFXN1-210ENST00000513725 SAMD11Q96NU1 681 aa14.49□□□□□ -0.09
SFXN1-210ENST00000513725 HMG20BQ9P0W2 317 aa14.49□□□□□ -0.09
SFXN1-210ENST00000513725 ASTN1O14525 1302 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms