RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 FAM133AQ8N9E0 248 aa14.85□□□□□ -0.03
UBE2D3-231ENST00000513098 KLHDC9Q8NEP7 349 aa14.85□□□□□ -0.03
UBE2D3-231ENST00000513098 LRCH3Q96II8 777 aa14.85□□□□□ -0.03
UBE2D3-231ENST00000513098 FGD4Q96M96 766 aa14.85□□□□□ -0.03
UBE2D3-231ENST00000513098 TTC14Q96N46 770 aa14.85□□□□□ -0.03
UBE2D3-231ENST00000513098 LBHD1Q9BQE6 289 aaPredicted RBP14.85□□□□□ -0.03
UBE2D3-231ENST00000513098 ABHD16BQ9H3Z7 469 aa14.85□□□□□ -0.03
UBE2D3-231ENST00000513098 NMT2O60551 498 aa14.84□□□□□ -0.03
UBE2D3-231ENST00000513098 NKX3-2P78367 333 aa14.84□□□□□ -0.03
UBE2D3-231ENST00000513098 MDM2Q00987 491 aaPredicted RBP14.84□□□□□ -0.03
UBE2D3-231ENST00000513098 ACVR2BQ13705 512 aa14.84□□□□□ -0.03
UBE2D3-231ENST00000513098 DCAF4Q8WV16 495 aa14.84□□□□□ -0.03
UBE2D3-231ENST00000513098 ACAD9Q9H845 621 aa14.84□□□□□ -0.03
UBE2D3-231ENST00000513098 PRKAG2Q9UGJ0 569 aa14.84□□□□□ -0.03
UBE2D3-231ENST00000513098 TRIM6-TRIM34B2RNG4 842 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 PGK1P00558 417 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 SDSP20132 328 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 CST5P28325 142 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 MFAP1P55081 439 aaKnown RBP14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 NMIQ13287 307 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 ZNF589Q86UQ0 364 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 FERMT2Q96AC1 680 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 AGBL1Q96MI9 1066 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 TOX2Q96NM4 488 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 KATNBL1Q9H079 304 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 PRR12Q9ULL5 1215 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 ATP11BQ9Y2G3 1177 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 CCDC171Q6TFL3 1326 aa14.83□□□□□ -0.04
UBE2D3-231ENST00000513098 A0A1W2PQ45 241 aaPredicted RBP14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 A0A1W2PQY0 241 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 MOXD2PA6NHM9 499 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 TRIM60Q495X7 471 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 KCTD1Q719H9 257 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 ARMCX2Q7L311 632 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 ANKRD33Q7Z3H0 272 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 TRERF1Q96PN7 1200 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 TMEM47Q9BQJ4 181 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 UPF3AQ9H1J1 476 aaKnown RBP14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 A1CFQ9NQ94 594 aaKnown RBP14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 PDLIM7Q9NR12 457 aa14.82□□□□□ -0.04
UBE2D3-231ENST00000513098 TRIM43BA6NCK2 446 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 ASB14A6NK59 587 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 ICAM1P05362 532 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 SLC4A3P48751 1232 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 ACLYP53396 1101 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 GJA9P57773 515 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 CNTN2Q02246 1040 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 TLE2Q04725 743 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 CCDC144BQ3MJ40 725 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 FAM109BQ6ICB4 259 aaPredicted RBP14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 B4GALNT3Q6L9W6 998 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 MFSD6Q6ZSS7 791 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 CCDC144CPQ8IYA2 1237 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 EXOC6Q8TAG9 804 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 NUP133Q8WUM0 1156 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 RILPL2Q969X0 211 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 TRIM43Q96BQ3 446 aaPredicted RBP14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 RANBP17Q9H2T7 1088 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 RNF146Q9NTX7 359 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 PNMA2Q9UL42 364 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 ELP1O95163 1332 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 SYNRGQ9UMZ2 1314 aa14.81□□□□□ -0.04
UBE2D3-231ENST00000513098 MCM3APO60318 1980 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 SOWAHBA6NEL2 793 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 HIP1O00291 1037 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 KIAA0355O15063 1070 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 SNHG28P0DPA3 235 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 IKQ13123 557 aaPredicted RBP14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 KCNA10Q16322 511 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 PCSK9Q8NBP7 692 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 MORC4Q8TE76 937 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 YTHDC1Q96MU7 727 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 RNF41Q9H4P4 317 aaPredicted RBP14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 HOMER2Q9NSB8 354 aa14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 ZHX1Q9UKY1 873 aaPredicted RBP14.8□□□□□ -0.04
UBE2D3-231ENST00000513098 LOC102724159A0A0B4J2E5 919 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 ADCY6O43306 1168 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 ALAS1P13196 640 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 CDK7P50613 346 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 LTBP2Q14767 1821 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 PWP2Q15269 919 aaKnown RBP14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 SH3RF1Q7Z6J0 888 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 DGKHQ86XP1 1220 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 DEFB123Q8N688 67 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 ANKS1AQ92625 1134 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 LENG1Q96BZ8 264 aaPredicted RBP14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 SPC25Q9HBM1 224 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 CYP39A1Q9NYL5 469 aa14.79□□□□□ -0.04
UBE2D3-231ENST00000513098 ZNF213O14771 459 aa14.78□□□□□ -0.04
UBE2D3-231ENST00000513098 CTAGE5O15320 804 aa14.78□□□□□ -0.04
UBE2D3-231ENST00000513098 CLTBP09497 229 aa14.78□□□□□ -0.04
UBE2D3-231ENST00000513098 PDHBP11177 359 aa14.78□□□□□ -0.04
UBE2D3-231ENST00000513098 HAND2P61296 217 aa14.78□□□□□ -0.04
UBE2D3-231ENST00000513098 FAAP100Q0VG06 881 aa14.78□□□□□ -0.04
UBE2D3-231ENST00000513098 CCDC178Q5BJE1 867 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms