RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 DUSP11O75319 330 aaKnown RBP17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 CLTBP09497 229 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 ACLYP53396 1101 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 ACVR2BQ13705 512 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 ALX1Q15699 326 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 SH3RF1Q7Z6J0 888 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 NUP133Q8WUM0 1156 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 BADQ92934 168 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 TRIM43Q96BQ3 446 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 INCENPQ9NQS7 918 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 TACC3Q9Y6A5 838 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 ZNF536O15090 1300 aa17.41■□□□□ 0.38
CCHCR1-229ENST00000512418 RANBP6O60518 1105 aaKnown RBP17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 NMT2O60551 498 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 CST5P28325 142 aaPredicted RBP17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 NOVP48745 357 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 AAMPQ13685 434 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 TKFCQ3LXA3 575 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 MCMDC2Q4G0Z9 681 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 ARMCX2Q7L311 632 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 SLC17A8Q8NDX2 589 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 KLHDC9Q8NEP7 349 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 FAM227BQ96M60 508 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 STARD7Q9NQZ5 370 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 RNF146Q9NTX7 359 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 STXBP5LQ9Y2K9 1186 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 MCM3APO60318 1980 aa17.4■□□□□ 0.38
CCHCR1-229ENST00000512418 A0A0D9SFI3 127 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 POTEB2H3BUK9 544 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 PQBP1O60828 265 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 FGRP09769 529 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 SHHQ15465 462 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 CCDC144BQ3MJ40 725 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 FAM109BQ6ICB4 259 aaPredicted RBP17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 CCSAPQ6IQ19 270 aaPredicted RBP17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 RCSD1Q6JBY9 416 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 KCTD1Q719H9 257 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 CCDC144CPQ8IYA2 1237 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 FAM133AQ8N9E0 248 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 CHMP4CQ96CF2 233 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 AGBL1Q96MI9 1066 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 SPC25Q9HBM1 224 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 A1CFQ9NQ94 594 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 ZMYM6O95789 1325 aa17.39■□□□□ 0.37
CCHCR1-229ENST00000512418 FGAP02671 866 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 CNTN2Q02246 1040 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 KCNA10Q16322 511 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 ANKRD33Q7Z3H0 272 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 PCSK9Q8NBP7 692 aaKnown RBP17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 DCAF4Q8WV16 495 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 GLT1D1Q96MS3 346 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 TOX2Q96NM4 488 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 TRERF1Q96PN7 1200 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 LNPKQ9C0E8 428 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 TOMM22Q9NS69 142 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 PRR12Q9ULL5 1215 aa17.38■□□□□ 0.37
CCHCR1-229ENST00000512418 MYADML2A6NDP7 307 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 KIAA0355O15063 1070 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 ADCY6O43306 1168 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 C6orf222P0C671 652 aaPredicted RBP17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 HSPD1P10809 573 aaKnown RBP17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 ALAS1P13196 640 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 RAG1P15918 1043 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 GJA9P57773 515 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 CCDC96Q2M329 555 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 C9orf50Q5SZB4 431 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 CCDC174Q6PII3 467 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 KATNBL1Q9H079 304 aa17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 UPF3AQ9H1J1 476 aaKnown RBP17.37■□□□□ 0.37
CCHCR1-229ENST00000512418 ASB14A6NK59 587 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 DCDC2CA8MYV0 355 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 ITGB8P26012 769 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 NMIQ13287 307 aaPredicted RBP17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 RRP12Q5JTH9 1297 aaKnown RBP17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 TMEM39AQ9NV64 488 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 MTMR7Q9Y216 660 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 ELP1O95163 1332 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 MROH7Q68CQ1 1323 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 CCDC171Q6TFL3 1326 aa17.36■□□□□ 0.37
CCHCR1-229ENST00000512418 SOWAHBA6NEL2 793 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 ICAM1P05362 532 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 ASGR1P07306 291 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 TOP1P11387 765 aaKnown RBP17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 PCP11498 1178 aaKnown RBP17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 SNAP25P60880 206 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 FAAP100Q0VG06 881 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 ZNF697Q5TEC3 545 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 RWDD1Q9H446 243 aaPredicted RBP17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 TCP11L1Q9NUJ3 509 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 CYP39A1Q9NYL5 469 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 CCPG1Q9ULG6 757 aa17.35■□□□□ 0.37
CCHCR1-229ENST00000512418 LRRC37A2A6NM11 1700 aa17.34■□□□□ 0.37
CCHCR1-229ENST00000512418 NKX3-2P78367 333 aa17.34■□□□□ 0.37
CCHCR1-229ENST00000512418 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
CCHCR1-229ENST00000512418 MUM1L1Q5H9M0 696 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms