RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SNHG28P0DPA3 235 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 ZNF543Q08ER8 600 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 MUM1L1Q5H9M0 696 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 STOX1Q6ZVD7 989 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 DGKHQ86XP1 1220 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 ANKRD35Q8N283 1001 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 ANKLE1Q8NAG6 615 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 PNMA1Q8ND90 353 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 FGD4Q96M96 766 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 TINF2Q9BSI4 451 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 KRT23Q9C075 422 aa19.37■□□□□ 0.69
DDX41-213ENST00000512027 U3KPZ7 1027 aaPredicted RBP19.37■□□□□ 0.69
DDX41-213ENST00000512027 PFASO15067 1338 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 DNAJC25-GNG10A0A024R161 153 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 FDX1P10109 184 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 BTNL9Q6UXG8 535 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 NECAB2Q7Z6G3 386 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 CHST13Q8NET6 341 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 TRERF1Q96PN7 1200 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 HTATIP2Q9BUP3 242 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 RANBP17Q9H2T7 1088 aaKnown RBP19.36■□□□□ 0.69
DDX41-213ENST00000512027 ACAD9Q9H845 621 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 KAT14Q9H8E8 782 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 CNNM2Q9H8M5 875 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 RBM8AQ9Y5S9 174 aaKnown RBP19.36■□□□□ 0.69
DDX41-213ENST00000512027 DNAH12Q6ZR08 3092 aa19.36■□□□□ 0.69
DDX41-213ENST00000512027 LRRC37A2A6NM11 1700 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 H0YGN5 161 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 CNTN2Q02246 1040 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 BMP2KLQ5H9B9 411 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 MAP4K1Q92918 833 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 LENG1Q96BZ8 264 aaPredicted RBP19.35■□□□□ 0.69
DDX41-213ENST00000512027 ESYT1Q9BSJ8 1104 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 UBA5Q9GZZ9 404 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 C11orf49Q9H6J7 331 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 A1CFQ9NQ94 594 aaKnown RBP19.35■□□□□ 0.69
DDX41-213ENST00000512027 PCDH10Q9P2E7 1040 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 FBXO40Q9UH90 709 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 CCPG1Q9ULG6 757 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 DIS3Q9Y2L1 958 aaKnown RBP19.35■□□□□ 0.69
DDX41-213ENST00000512027 DDX49Q9Y6V7 483 aaKnown RBP19.35■□□□□ 0.69
DDX41-213ENST00000512027 MYH6P13533 1939 aa19.35■□□□□ 0.69
DDX41-213ENST00000512027 E7EWF7 191 aa19.34■□□□□ 0.69
DDX41-213ENST00000512027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.34■□□□□ 0.69
DDX41-213ENST00000512027 CHST3Q7LGC8 479 aa19.34■□□□□ 0.69
DDX41-213ENST00000512027 UBAC1Q9BSL1 405 aa19.34■□□□□ 0.69
DDX41-213ENST00000512027 LSG1Q9H089 658 aaKnown RBP19.34■□□□□ 0.69
DDX41-213ENST00000512027 SEPT4O43236 478 aa19.33■□□□□ 0.68
DDX41-213ENST00000512027 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
DDX41-213ENST00000512027 ICAM1P05362 532 aa19.33■□□□□ 0.68
DDX41-213ENST00000512027 CAPN2P17655 700 aa19.33■□□□□ 0.68
DDX41-213ENST00000512027 SEC23AQ15436 765 aa19.33■□□□□ 0.68
DDX41-213ENST00000512027 CCDC178Q5BJE1 867 aa19.33■□□□□ 0.68
DDX41-213ENST00000512027 ANKS1AQ92625 1134 aa19.33■□□□□ 0.68
DDX41-213ENST00000512027 PURBQ96QR8 312 aaKnown RBP19.33■□□□□ 0.68
DDX41-213ENST00000512027 SENP2Q9HC62 589 aa19.33■□□□□ 0.68
DDX41-213ENST00000512027 MSCO60682 206 aa19.32■□□□□ 0.68
DDX41-213ENST00000512027 SNAI1O95863 264 aaPredicted RBP19.32■□□□□ 0.68
DDX41-213ENST00000512027 ZNF865P0CJ78 1059 aaPredicted RBP19.32■□□□□ 0.68
DDX41-213ENST00000512027 COL6A1P12109 1028 aa19.32■□□□□ 0.68
DDX41-213ENST00000512027 TRDNQ13061 729 aa19.32■□□□□ 0.68
DDX41-213ENST00000512027 COL9A3Q14050 684 aaPredicted RBP19.32■□□□□ 0.68
DDX41-213ENST00000512027 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
DDX41-213ENST00000512027 IFIT1BQ5T764 474 aaKnown RBP19.32■□□□□ 0.68
DDX41-213ENST00000512027 NSMFQ6X4W1 530 aa19.32■□□□□ 0.68
DDX41-213ENST00000512027 ASTN1O14525 1302 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 SOWAHBA6NEL2 793 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 POTEB2H3BUK9 544 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 NFIBO00712 420 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 EVI5O60447 810 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 NEFLP07196 543 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 NT5C2P49902 561 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 ANTXR2P58335 489 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 TKFCQ3LXA3 575 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 KIAA1211Q6ZU35 1233 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 RALYLQ86SE5 291 aaKnown RBP19.31■□□□□ 0.68
DDX41-213ENST00000512027 FAM133AQ8N9E0 248 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 ANO2Q9NQ90 1003 aa19.31■□□□□ 0.68
DDX41-213ENST00000512027 ZHX1Q9UKY1 873 aaPredicted RBP19.31■□□□□ 0.68
DDX41-213ENST00000512027 SYNGAP1Q96PV0 1343 aa19.3■□□□□ 0.68
DDX41-213ENST00000512027 GPATCH4Q5T3I0 446 aaKnown RBP19.3■□□□□ 0.68
DDX41-213ENST00000512027 MAMDC4Q6UXC1 1216 aa19.3■□□□□ 0.68
DDX41-213ENST00000512027 C7orf61Q8IZ16 206 aa19.3■□□□□ 0.68
DDX41-213ENST00000512027 STAG2Q8N3U4 1231 aa19.3■□□□□ 0.68
DDX41-213ENST00000512027 NCOA7Q8NI08 942 aa19.3■□□□□ 0.68
DDX41-213ENST00000512027 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.3■□□□□ 0.68
DDX41-213ENST00000512027 CYP39A1Q9NYL5 469 aa19.3■□□□□ 0.68
DDX41-213ENST00000512027 CNPY2Q9Y2B0 182 aa19.3■□□□□ 0.68
DDX41-213ENST00000512027 IFIT3O14879 490 aaKnown RBP19.29■□□□□ 0.68
DDX41-213ENST00000512027 LRRC26Q2I0M4 334 aa19.29■□□□□ 0.68
DDX41-213ENST00000512027 USH1GQ495M9 461 aa19.29■□□□□ 0.68
DDX41-213ENST00000512027 ARMCX2Q7L311 632 aa19.29■□□□□ 0.68
DDX41-213ENST00000512027 CCDC144CPQ8IYA2 1237 aa19.29■□□□□ 0.68
DDX41-213ENST00000512027 MB21D2Q8IYB1 491 aaPredicted RBP19.29■□□□□ 0.68
DDX41-213ENST00000512027 ADGRF4Q8IZF3 695 aa19.29■□□□□ 0.68
DDX41-213ENST00000512027 SENP6Q9GZR1 1112 aaPredicted RBP19.29■□□□□ 0.68
DDX41-213ENST00000512027 GPHNQ9NQX3 736 aaPredicted RBP19.29■□□□□ 0.68
DDX41-213ENST00000512027 SLC27A2O14975 620 aa19.28■□□□□ 0.68
DDX41-213ENST00000512027 ADCY6O43306 1168 aa19.28■□□□□ 0.68
DDX41-213ENST00000512027 PGK1P00558 417 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms