RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TATDN1Q6P1N9 297 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPP4R3CPQ6ZMV5 832 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 BNIPLQ7Z465 357 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZSCAN30Q86W11 494 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 DZIP1LQ8IYY4 767 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 SLC35B4Q969S0 331 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 NAP1L5Q96NT1 182 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 TWSG1Q9GZX9 223 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNAJC18Q9H819 358 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 MTMR10Q9NXD2 777 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 CACNA1BQ00975 2339 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 EGFRP00533 1210 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 T-ENOLP0DO92 83 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATP1A3P13637 1013 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 CDR1P51861 262 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 TCEAL1Q15170 157 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 AKNAD1Q5T1N1 836 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 SLFN11Q7Z7L1 901 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 CREG2Q8IUH2 290 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 FUBP1Q96AE4 644 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 CHMP4CQ96CF2 233 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 RBM33Q96EV2 1170 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 SUCLG2Q96I99 432 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 INPP4AQ96PE3 977 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 POLR3CQ9BUI4 534 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 OSBPL7Q9BZF2 842 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 NEUROG2Q9H2A3 272 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 EFCC1Q9HA90 598 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 CWC22Q9HCG8 908 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 GTF2IRD1Q9UHL9 959 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 NR2E1Q9Y466 385 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATP6V0A2Q9Y487 856 aa1.96□□□□□ -2.1
TRAPPC13-211ENST00000512009 RBM47A0AV96 593 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GOLGA6L3A6NEY3 463 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPP1R3GB7ZBB8 358 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 H0Y858 1186 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATP2A1O14983 1001 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPP1R11O60927 126 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 N4BP1O75113 896 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 CYP1A1P04798 512 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SNHG28P0DPA3 235 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 RRS1Q15050 365 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 CT47A1Q5JQC4 288 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNTTIP2Q5QJE6 756 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZSCAN25Q6NSZ9 544 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 LRRC55Q6ZSA7 311 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SGMS1Q86VZ5 419 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ARHGEF1Q92888 912 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 TLR9Q9NR96 1032 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GPRC5DQ9NZD1 345 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 USP25Q9UHP3 1055 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 OGDHLQ9ULD0 1010 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 MAST3O60307 1309 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATP8B3O60423 1300 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATXN2Q99700 1313 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 HMX2A2RU54 273 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 RNF113AO15541 343 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 TNNT3P45378 269 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 NFIXQ14938 502 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 MEX3CQ5U5Q3 659 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 MCM10Q7L590 875 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SYNE4Q8N205 404 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 CD101Q93033 1021 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 OSBP2Q969R2 916 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GJD2Q9UKL4 321 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GRID1Q9ULK0 1009 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 NUP214P35658 2090 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 NCKAP5O14513 1909 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PHF20L1A8MW92 1017 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 F6X3S4 739 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GYPCP04921 128 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 TUBP50607 506 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GUCY2DQ02846 1103 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GABPAQ06546 454 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GRIK3Q13003 919 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 TBC1D25Q3MII6 688 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 WWC2Q6AWC2 1192 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 DCLRE1AQ6PJP8 1040 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 CASC1Q6TDU7 716 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 C17orf99Q6UX52 265 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 FAM83AQ86UY5 434 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PLCD3Q8N3E9 789 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GTF3C6Q969F1 213 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF419Q96HQ0 510 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 IDI2Q9BXS1 227 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 RWDD1Q9H446 243 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 STK32BQ9NY57 414 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 LMCD1Q9NZU5 365 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 HUWE1Q7Z6Z7 4374 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 APCP25054 2843 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 FAM205CA6NFA0 338 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 A6NHS1 94 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 JAK2O60674 1132 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ALAS1P13196 640 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 MTF1Q14872 753 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 R3HDM1Q15032 1099 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PLEKHG4Q58EX7 1191 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 KIAA1958Q8N8K9 716 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms