RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 NEK1Q96PY6 1258 aa18.79■□□□□ 0.6
SIM1-204ENST00000511871 LY9Q9HBG7 655 aa18.79■□□□□ 0.6
SIM1-204ENST00000511871 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
SIM1-204ENST00000511871 MCM3APO60318 1980 aa18.79■□□□□ 0.6
SIM1-204ENST00000511871 PARP1P09874 1014 aaKnown RBP18.78■□□□□ 0.6
SIM1-204ENST00000511871 CCL5P13501 91 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 TRIM32Q13049 653 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 KCTD2Q14681 263 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 ADCK5Q3MIX3 580 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 DPP9Q86TI2 863 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 CHST13Q8NET6 341 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 TMEM106CQ9BVX2 250 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 UBA5Q9GZZ9 404 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 CPVLQ9H3G5 476 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 FLRT1Q9NZU1 646 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 LCTP09848 1927 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 POTEFA5A3E0 1075 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 SH2B2O14492 632 aaPredicted RBP18.78■□□□□ 0.6
SIM1-204ENST00000511871 KRT32Q14532 448 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 UNC93B1Q9H1C4 597 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 FBXO40Q9UH90 709 aa18.78■□□□□ 0.6
SIM1-204ENST00000511871 IGHA2P01877 340 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 ICAM1P05362 532 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 RGS19P49795 217 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 TROAPQ12815 778 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 GRM4Q14833 912 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 TKFCQ3LXA3 575 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 MAP3K21Q5TCX8 1036 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 STAG2Q8N3U4 1231 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 RNF146Q9NTX7 359 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 MAD2L2Q9UI95 211 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 SNX14Q9Y5W7 946 aa18.77■□□□□ 0.6
SIM1-204ENST00000511871 FRMPD3Q5JV73 1810 aa18.76■□□□□ 0.59
SIM1-204ENST00000511871 WDR19Q8NEZ3 1342 aa18.76■□□□□ 0.59
SIM1-204ENST00000511871 PALM3A6NDB9 673 aaPredicted RBP18.76■□□□□ 0.59
SIM1-204ENST00000511871 ALAS1P13196 640 aa18.76■□□□□ 0.59
SIM1-204ENST00000511871 EXOSC10Q01780 885 aaKnown RBP18.76■□□□□ 0.59
SIM1-204ENST00000511871 USP26Q9BXU7 913 aa18.76■□□□□ 0.59
SIM1-204ENST00000511871 RNF208Q9H0X6 261 aa18.76■□□□□ 0.59
SIM1-204ENST00000511871 SLC5A4Q9NY91 659 aa18.76■□□□□ 0.59
SIM1-204ENST00000511871 CCPG1Q9ULG6 757 aa18.76■□□□□ 0.59
SIM1-204ENST00000511871 PGK2P07205 417 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 LIFRP42702 1097 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 ZNF792Q3KQV3 632 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 OLFML2BQ68BL8 750 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 DHX32Q7L7V1 743 aaKnown RBP18.75■□□□□ 0.59
SIM1-204ENST00000511871 CATIPQ7Z7H3 387 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 ADGRF4Q8IZF3 695 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 TRERF1Q96PN7 1200 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 LRRC2Q9BYS8 371 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 ACAD9Q9H845 621 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 HOMER2Q9NSB8 354 aa18.75■□□□□ 0.59
SIM1-204ENST00000511871 DNAJC25-GNG10A0A024R161 153 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 KLRF2D3W0D1 207 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 TAL1P17542 331 aaPredicted RBP18.74■□□□□ 0.59
SIM1-204ENST00000511871 CACNB2Q08289 660 aaPredicted RBP18.74■□□□□ 0.59
SIM1-204ENST00000511871 ZNF654Q8IZM8 581 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 MAML3Q96JK9 1138 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 DIS3Q9Y2L1 958 aaKnown RBP18.74■□□□□ 0.59
SIM1-204ENST00000511871 RPTORQ8N122 1335 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 DDAH1O94760 285 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 GJB1P08034 283 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 PRKAR2AP13861 404 aaKnown RBP18.74■□□□□ 0.59
SIM1-204ENST00000511871 MUM1L1Q5H9M0 696 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 MFSD14CQ5VZR4 134 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 DDX11Q96FC9 970 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.74■□□□□ 0.59
SIM1-204ENST00000511871 JMJD4Q9H9V9 463 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 HMX1Q9NP08 348 aaPredicted RBP18.74■□□□□ 0.59
SIM1-204ENST00000511871 PAK6Q9NQU5 681 aaPredicted RBP18.74■□□□□ 0.59
SIM1-204ENST00000511871 PNMA2Q9UL42 364 aa18.74■□□□□ 0.59
SIM1-204ENST00000511871 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
SIM1-204ENST00000511871 HMGB1P09429 215 aaKnown RBP18.73■□□□□ 0.59
SIM1-204ENST00000511871 EN2P19622 333 aaPredicted RBP18.73■□□□□ 0.59
SIM1-204ENST00000511871 CDC37Q16543 378 aaPredicted RBP18.73■□□□□ 0.59
SIM1-204ENST00000511871 SLC35G1Q2M3R5 365 aa18.73■□□□□ 0.59
SIM1-204ENST00000511871 NFXL1Q6ZNB6 911 aa18.73■□□□□ 0.59
SIM1-204ENST00000511871 ANKRD35Q8N283 1001 aa18.73■□□□□ 0.59
SIM1-204ENST00000511871 TCEANC2Q96MN5 208 aa18.73■□□□□ 0.59
SIM1-204ENST00000511871 MAP3K14Q99558 947 aa18.73■□□□□ 0.59
SIM1-204ENST00000511871 A1CFQ9NQ94 594 aaKnown RBP18.73■□□□□ 0.59
SIM1-204ENST00000511871 CYP2C19P33261 490 aa18.72■□□□□ 0.59
SIM1-204ENST00000511871 SGMS1Q86VZ5 419 aa18.72■□□□□ 0.59
SIM1-204ENST00000511871 NUP133Q8WUM0 1156 aa18.72■□□□□ 0.59
SIM1-204ENST00000511871 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
SIM1-204ENST00000511871 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
SIM1-204ENST00000511871 MYL10Q9BUA6 226 aa18.72■□□□□ 0.59
SIM1-204ENST00000511871 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
SIM1-204ENST00000511871 DHX16O60231 1041 aaKnown RBP18.71■□□□□ 0.59
SIM1-204ENST00000511871 CCND3P30281 292 aaPredicted RBP18.71■□□□□ 0.59
SIM1-204ENST00000511871 GJA8P48165 433 aa18.71■□□□□ 0.59
SIM1-204ENST00000511871 QRICH1Q2TAL8 776 aa18.71■□□□□ 0.59
SIM1-204ENST00000511871 SGPL1O95470 568 aa18.71■□□□□ 0.58
SIM1-204ENST00000511871 CPA1P15085 419 aa18.71■□□□□ 0.58
SIM1-204ENST00000511871 U2AF1L4Q8WU68 220 aaKnown RBP18.71■□□□□ 0.58
SIM1-204ENST00000511871 CLEC4DQ8WXI8 215 aa18.71■□□□□ 0.58
SIM1-204ENST00000511871 SHISA4Q96DD7 197 aa18.71■□□□□ 0.58
SIM1-204ENST00000511871 FGD4Q96M96 766 aa18.71■□□□□ 0.58
SIM1-204ENST00000511871 DEFB118Q96PH6 123 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms