RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 ZSWIM5Q9P217 1185 aa11.56□□□□□ -0.56
PTPN20-225ENST00000511769 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
PTPN20-225ENST00000511769 COG5Q9UP83 839 aa11.56□□□□□ -0.56
PTPN20-225ENST00000511769 AFG3L2Q9Y4W6 797 aa11.56□□□□□ -0.56
PTPN20-225ENST00000511769 LAMA4Q16363 1823 aa11.56□□□□□ -0.56
PTPN20-225ENST00000511769 NEDD4P46934 1319 aa11.56□□□□□ -0.56
PTPN20-225ENST00000511769 WDR19Q8NEZ3 1342 aa11.56□□□□□ -0.56
PTPN20-225ENST00000511769 BAZ2AQ9UIF9 1905 aaKnown RBP11.56□□□□□ -0.56
PTPN20-225ENST00000511769 NAV1Q8NEY1 1877 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 RLFQ13129 1914 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 KBTBD13C9JR72 458 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 ORC4O43929 436 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 FGRP09769 529 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 PTPRAP18433 802 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 NFIAQ12857 509 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 ERMP1Q7Z2K6 904 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 IQCA1Q86XH1 822 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 SCYL3Q8IZE3 742 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPN20-225ENST00000511769 LRRC2Q9BYS8 371 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 SH2B1Q9NRF2 756 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-225ENST00000511769 PI4KBQ9UBF8 816 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 FAM198AQ9UFP1 575 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 SWAP70Q9UH65 585 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 CFAP54Q96N23 3096 aa11.55□□□□□ -0.56
PTPN20-225ENST00000511769 TSPY2A6NKD2 308 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 IFIT3O14879 490 aaKnown RBP11.54□□□□□ -0.56
PTPN20-225ENST00000511769 MSCO60682 206 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 PRDM1O75626 825 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 CLTBP09497 229 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 ALADP13716 330 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 CDK8P49336 464 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 TLE2Q04725 743 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 RAB30Q15771 203 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 CCDC178Q5BJE1 867 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 TMEM67Q5HYA8 995 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 C16orf86Q6ZW13 317 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-225ENST00000511769 TMTC2Q8N394 836 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 FBXL16Q8N461 479 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 CRACR2BQ8N4Y2 399 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-225ENST00000511769 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 FAM151AQ8WW52 585 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 BRF1Q92994 677 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 CHMP4CQ96CF2 233 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 DYNLL2Q96FJ2 89 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 TMX3Q96JJ7 454 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
PTPN20-225ENST00000511769 UBAC1Q9BSL1 405 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 MTA3Q9BTC8 594 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 SLC28A3Q9HAS3 691 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 SERPINB13Q9UIV8 391 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 NAP1L2Q9ULW6 460 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-225ENST00000511769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPN20-225ENST00000511769 MYH1P12882 1939 aa11.54□□□□□ -0.56
PTPN20-225ENST00000511769 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 FOCADQ5VW36 1801 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 ROBO3Q96MS0 1386 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 CCDC69A6NI79 296 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 TSPY3P0CV98 308 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 TSPY8P0CW00 308 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 RGS2P41220 211 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 TOB2Q14106 344 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-225ENST00000511769 SYNE3Q6ZMZ3 975 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 NFXL1Q6ZNB6 911 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 APBA2Q99767 749 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 EHD4Q9H223 541 aa11.53□□□□□ -0.56
PTPN20-225ENST00000511769 KIAA0355O15063 1070 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
PTPN20-225ENST00000511769 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.57
PTPN20-225ENST00000511769 ANTXR2P58335 489 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 TFAP4Q01664 338 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 APOBRQ0VD83 1088 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 COL9A3Q14050 684 aaPredicted RBP11.52□□□□□ -0.57
PTPN20-225ENST00000511769 WTAPQ15007 396 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 FAM47AQ5JRC9 791 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 GJD3Q8N144 294 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 IGDCC4Q8TDY8 1250 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 HLA-CQ95604 372 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 FERMT2Q96AC1 680 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 ZNF274Q96GC6 653 aaPredicted RBP11.52□□□□□ -0.57
PTPN20-225ENST00000511769 ZSCAN10Q96SZ4 725 aaPredicted RBP11.52□□□□□ -0.57
PTPN20-225ENST00000511769 ZKSCAN3Q9BRR0 538 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 TPCN1Q9ULQ1 816 aa11.52□□□□□ -0.57
PTPN20-225ENST00000511769 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.52□□□□□ -0.57
PTPN20-225ENST00000511769 CHD9Q3L8U1 2897 aa11.51□□□□□ -0.57
PTPN20-225ENST00000511769 PTPRFP10586 1907 aa11.51□□□□□ -0.57
PTPN20-225ENST00000511769 DDTLA6NHG4 134 aaPredicted RBP11.51□□□□□ -0.57
PTPN20-225ENST00000511769 SH2B2O14492 632 aaPredicted RBP11.51□□□□□ -0.57
PTPN20-225ENST00000511769 PEX10O60683 326 aa11.51□□□□□ -0.57
PTPN20-225ENST00000511769 ADCYAP1R1P41586 468 aa11.51□□□□□ -0.57
PTPN20-225ENST00000511769 LIFRP42702 1097 aa11.51□□□□□ -0.57
PTPN20-225ENST00000511769 STK3Q13188 491 aa11.51□□□□□ -0.57
PTPN20-225ENST00000511769 ME3Q16798 604 aa11.51□□□□□ -0.57
PTPN20-225ENST00000511769 MFSD14CQ5VZR4 134 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms