RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 ZKSCAN3Q9BRR0 538 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 THEGQ9P2T0 379 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 STX8Q9UNK0 236 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 PALM3A6NDB9 673 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-209ENST00000511467 ZNF853P0CG23 659 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 GOLGA8FQ08AF8 430 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 GOLGA8DPQ0D2H9 430 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 TCP11Q8WWU5 503 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 ZNF592Q92610 1267 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 BICD1Q96G01 975 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 SLC4A4Q9Y6R1 1079 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 SCN4AP35499 1836 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 MYO1EQ12965 1108 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 DCAF4Q8WV16 495 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 LPAR1Q92633 364 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 PPP2R3CQ969Q6 453 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 ASNSP08243 561 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 XRCC6P12956 609 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SLC9C2Q5TAH2 1124 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 ADALQ6DHV7 355 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 RDM1Q8NG50 284 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 FNBP1Q96RU3 617 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 DDX50Q9BQ39 737 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 FRMD8Q9BZ67 464 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CTAGE15A4D2H0 777 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SGSM2O43147 1006 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 HNRNPCL1O60812 293 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 KRT16P08779 473 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CTAGE8P0CG41 777 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 NMIQ13287 307 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 MAPK8IP2Q13387 824 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CFAP221Q4G0U5 840 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TADA2BQ86TJ2 420 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CTAGE6Q86UF2 777 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CTAGE4Q8IX94 777 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 DTNBP1Q96EV8 351 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 COA1Q9GZY4 146 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 BOLA2Q9H3K6 86 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 POLR3EQ9NVU0 708 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 DDX25Q9UHL0 483 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 IQCA1LA6NCM1 817 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 GGPS1O95749 300 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 ADCY7P51828 1080 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TTLL12Q14166 644 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CALCRLQ16602 461 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 OTUD6BQ8N6M0 293 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 OSCP1Q8WVF1 389 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SFNP31947 248 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 GLE1Q53GS7 698 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CREB3L3Q68CJ9 461 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 KRT222Q8N1A0 295 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 ZNF557Q8N988 423 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 PRPF38AQ8NAV1 312 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 GIMAP7Q8NHV1 300 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 APBB2Q92870 758 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 MRFAP1L1Q96HT8 127 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SLC12A6Q9UHW9 1150 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 CCNL1Q9UK58 526 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SLC8A2Q9UPR5 921 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 RBM8AQ9Y5S9 174 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 PFASO15067 1338 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SCN3AQ9NY46 2000 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 LRP6O75581 1613 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 RGPD2P0DJD1 1756 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TOMM70O94826 608 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TTLL1O95922 423 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 OSBPP22059 807 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 FYB2Q5VWT5 728 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 PCGF5Q86SE9 256 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 MAP7D3Q8IWC1 876 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 MCPH1Q8NEM0 835 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 ABCB11O95342 1321 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 LRRC37A3O60309 1634 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 KIAA1551Q9HCM1 1747 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 RBBP6Q7Z6E9 1792 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 AKR1B15C9JRZ8 316 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 NOP56O00567 594 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TTI1O43156 1089 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 GJB2P29033 226 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 EIF3BP55884 814 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SETDB1Q15047 1291 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 BRD3Q15059 726 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 DPP8Q6V1X1 898 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TEX11Q8IYF3 940 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 FAN1Q9Y2M0 1017 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 SAMM50Q9Y512 469 aa5.44□□□□□ -1.54
PTPN13-209ENST00000511467 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.44□□□□□ -1.54
PTPN13-209ENST00000511467 KIF3CO14782 793 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 IREB2P48200 963 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 KMT5BQ4FZB7 885 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TNNI3KQ59H18 835 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TMCO4Q5TGY1 634 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 C17orf75Q9HAS0 396 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 FPGT-TNNI3KV9GXZ4 949 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 NFAT5O94916 1531 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 ASXL3Q9C0F0 2248 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 SLC1A4P43007 532 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 ZNF135P52742 658 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms