RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 CCPG1Q9ULG6 757 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 RIPK3Q9Y572 518 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 BRCA2P51587 3418 aa9.27□□□□□ -0.93
SMAD1-209ENST00000511125 CCL15-CCL14A0A0B4J2E2 113 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 PNMA6FA0A0J9YX94 578 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 MMP1P03956 469 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 XBP1P17861 261 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 IRX3P78415 501 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-209ENST00000511125 KIF23Q02241 960 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-209ENST00000511125 ZNF174Q15697 407 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 CCL15Q16663 113 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 SPECC1Q5M775 1068 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 FBXO11Q86XK2 927 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 CHURC1Q8WUH1 139 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 WASF1Q92558 559 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 SLF1Q9BQI6 1058 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 RIOX1Q9H6W3 641 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 CLIC4Q9Y696 253 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 GADD45BO75293 160 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-209ENST00000511125 INF2Q27J81 1249 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 SLC30A10Q6XR72 485 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 USP28Q96RU2 1077 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 SPZ1Q9BXG8 430 aa9.26□□□□□ -0.93
SMAD1-209ENST00000511125 COL2A1P02458 1487 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-209ENST00000511125 USP14P54578 494 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 RESTQ13127 1097 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 LDLRAD1Q5T700 205 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PRPF38AQ8NAV1 312 aaKnown RBP9.25□□□□□ -0.93
SMAD1-209ENST00000511125 SMCR8Q8TEV9 937 aaPredicted RBP9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PANK2Q9BZ23 570 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 SPDYE5A6NIY4 337 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 NFIBO00712 420 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 SORBS3O60504 671 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 CALML3P27482 149 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 MCM7P33993 719 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 KRT2P35908 639 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PPATQ06203 517 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PPP2R5BQ15173 497 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 MUM1L1Q5H9M0 696 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 SAPCD2Q86UD0 394 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 WDR18Q9BV38 432 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PSTPIP2Q9H939 334 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 BARHL2Q9NY43 387 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 CIZ1Q9ULV3 898 aaPredicted RBP9.25□□□□□ -0.93
SMAD1-209ENST00000511125 SCN4AP35499 1836 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 WDR46O15213 610 aaKnown RBP9.25□□□□□ -0.93
SMAD1-209ENST00000511125 AOC2O75106 756 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 COG2Q14746 738 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 ZRSR1Q15695 479 aaKnown RBP9.25□□□□□ -0.93
SMAD1-209ENST00000511125 LETM2Q2VYF4 491 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 SNRNP48Q6IEG0 339 aaKnown RBP9.25□□□□□ -0.93
SMAD1-209ENST00000511125 BLIDQ8IZY5 108 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PHF20Q9BVI0 1012 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 AMNQ9BXJ7 453 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PKD2L1Q9P0L9 805 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 FEM1BQ9UK73 627 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 PCDHB6Q9Y5E3 794 aa9.25□□□□□ -0.93
SMAD1-209ENST00000511125 TRMT1LQ7Z2T5 733 aaKnown RBP9.24□□□□□ -0.93
SMAD1-209ENST00000511125 NCAPG2Q86XI2 1143 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 FAM43AQ8N2R8 423 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 ANKRD13CQ8N6S4 541 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 SMC1BQ8NDV3 1235 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 LZTS2Q9BRK4 669 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 ASCC2Q9H1I8 757 aaPredicted RBP9.24□□□□□ -0.93
SMAD1-209ENST00000511125 WDR90Q96KV7 1748 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 CCDC194A0A1B0GVG4 234 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 BTBD19C9JJ37 291 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 TOMM70O94826 608 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 SNAPC2Q13487 334 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 TMEM132BQ14DG7 1078 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 SF3A1Q15459 793 aaKnown RBP9.24□□□□□ -0.93
SMAD1-209ENST00000511125 NPY5RQ15761 445 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 Q3C1V9 767 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 BRI3BPQ8WY22 251 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 PPP1R9AQ9ULJ8 1098 aa9.24□□□□□ -0.93
SMAD1-209ENST00000511125 C19orf81C9J6K1 198 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 PDHXO00330 501 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 VWA5AO00534 786 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 ZBED4O75132 1171 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 MCM4P33991 863 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 ADCY7P51828 1080 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 RCAN1P53805 252 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 NOL9Q5SY16 702 aaKnown RBP9.23□□□□□ -0.93
SMAD1-209ENST00000511125 POTEEQ6S8J3 1075 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 CATSPERGQ6ZRH7 1159 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 NOSTRINQ8IVI9 506 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 LPAR1Q92633 364 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 SPATA32Q96LK8 384 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 PTPN18Q99952 460 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 C6orf50Q9HD87 102 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 TXNRD2Q9NNW7 524 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 PCDHA6Q9UN73 950 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 PCDHA8Q9Y5H6 950 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 STK36Q9NRP7 1315 aa9.23□□□□□ -0.93
SMAD1-209ENST00000511125 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
SMAD1-209ENST00000511125 CDC25AP30304 524 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms