RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 CCDC144BQ3MJ40 725 aa17.64■□□□□ 0.41
SMAD5-206ENST00000509962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMAD5-206ENST00000509962 FSD1Q9BTV5 496 aa17.64■□□□□ 0.41
SMAD5-206ENST00000509962 ELP1O95163 1332 aa17.64■□□□□ 0.41
SMAD5-206ENST00000509962 STAT2P52630 851 aa17.63■□□□□ 0.41
SMAD5-206ENST00000509962 EPHB4P54760 987 aa17.63■□□□□ 0.41
SMAD5-206ENST00000509962 PPARAQ07869 468 aa17.63■□□□□ 0.41
SMAD5-206ENST00000509962 IKQ13123 557 aaPredicted RBP17.63■□□□□ 0.41
SMAD5-206ENST00000509962 GNASQ5JWF2 1037 aa17.63■□□□□ 0.41
SMAD5-206ENST00000509962 PPP4R3BQ5MIZ7 849 aa17.63■□□□□ 0.41
SMAD5-206ENST00000509962 CCSAPQ6IQ19 270 aaPredicted RBP17.63■□□□□ 0.41
SMAD5-206ENST00000509962 ARMCX2Q7L311 632 aa17.63■□□□□ 0.41
SMAD5-206ENST00000509962 HOMER2Q9NSB8 354 aa17.63■□□□□ 0.41
SMAD5-206ENST00000509962 TIMP1P01033 207 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 ASGR1P07306 291 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 CST5P28325 142 aaPredicted RBP17.62■□□□□ 0.41
SMAD5-206ENST00000509962 SLC1A4P43007 532 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 CCDC144CPQ8IYA2 1237 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 STAG1Q8WVM7 1258 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 ACAD9Q9H845 621 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 MROH7Q68CQ1 1323 aa17.62■□□□□ 0.41
SMAD5-206ENST00000509962 A0A0C4DFX4 3053 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.61■□□□□ 0.41
SMAD5-206ENST00000509962 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.61■□□□□ 0.41
SMAD5-206ENST00000509962 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 MCCP23508 829 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 CDK7P50613 346 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 GJA9P57773 515 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 CNTN2Q02246 1040 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 NOL8Q76FK4 1167 aaKnown RBP17.61■□□□□ 0.41
SMAD5-206ENST00000509962 MAFAQ8NHW3 353 aaPredicted RBP17.61■□□□□ 0.41
SMAD5-206ENST00000509962 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 MYLIPQ8WY64 445 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 GMCL1Q96IK5 515 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 COL25A1Q9BXS0 654 aaPredicted RBP17.61■□□□□ 0.41
SMAD5-206ENST00000509962 TTYH1Q9H313 450 aaPredicted RBP17.61■□□□□ 0.41
SMAD5-206ENST00000509962 ZBTB47Q9UFB7 747 aaPredicted RBP17.61■□□□□ 0.41
SMAD5-206ENST00000509962 STX8Q9UNK0 236 aa17.61■□□□□ 0.41
SMAD5-206ENST00000509962 TSPY2A6NKD2 308 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 IRX5P78411 483 aaPredicted RBP17.6■□□□□ 0.41
SMAD5-206ENST00000509962 TNFAIP2Q03169 654 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 TKFCQ3LXA3 575 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 RCSD1Q6JBY9 416 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 MFSD5Q6N075 450 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 CCDC174Q6PII3 467 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 FGD4Q96M96 766 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 AGBL1Q96MI9 1066 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 TRERF1Q96PN7 1200 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 UPF3AQ9H1J1 476 aaKnown RBP17.6■□□□□ 0.41
SMAD5-206ENST00000509962 PCDHB15Q9Y5E8 787 aa17.6■□□□□ 0.41
SMAD5-206ENST00000509962 PLIN4Q96Q06 1357 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 TMEM265A0A087WTH1 108 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 A0A0U1RQG5 324 aaPredicted RBP17.59■□□□□ 0.41
SMAD5-206ENST00000509962 ASB14A6NK59 587 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 ARVCFO00192 962 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 TLR3O15455 904 aaKnown RBP17.59■□□□□ 0.41
SMAD5-206ENST00000509962 ADCY6O43306 1168 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 PLA2G6O60733 806 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 ALAS1P13196 640 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 MX1P20591 662 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 OTUD7AQ8TE49 926 aaPredicted RBP17.59■□□□□ 0.41
SMAD5-206ENST00000509962 RNF146Q9NTX7 359 aa17.59■□□□□ 0.41
SMAD5-206ENST00000509962 ZNF536O15090 1300 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 FOSL2P15408 326 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 CTDSPL2Q05D32 466 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMAD5-206ENST00000509962 KCTD1Q719H9 257 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 TMEM199Q8N511 208 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 A1CFQ9NQ94 594 aaKnown RBP17.58■□□□□ 0.4
SMAD5-206ENST00000509962 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 TBX21Q9UL17 535 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 MCM3APO60318 1980 aa17.58■□□□□ 0.4
SMAD5-206ENST00000509962 CUL9Q8IWT3 2517 aa17.57■□□□□ 0.4
SMAD5-206ENST00000509962 SOWAHBA6NEL2 793 aa17.57■□□□□ 0.4
SMAD5-206ENST00000509962 RANBP6O60518 1105 aaKnown RBP17.57■□□□□ 0.4
SMAD5-206ENST00000509962 BEX3Q00994 111 aa17.57■□□□□ 0.4
SMAD5-206ENST00000509962 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.57■□□□□ 0.43e-6■□□□□ 10.1
SMAD5-206ENST00000509962 KATNBL1Q9H079 304 aa17.57■□□□□ 0.4
SMAD5-206ENST00000509962 AP5M1Q9H0R1 490 aa17.57■□□□□ 0.4
SMAD5-206ENST00000509962 IL17RBQ9NRM6 502 aa17.57■□□□□ 0.4
SMAD5-206ENST00000509962 MTMR7Q9Y216 660 aa17.57■□□□□ 0.4
SMAD5-206ENST00000509962 ZEB2O60315 1214 aa17.56■□□□□ 0.4
SMAD5-206ENST00000509962 SNAP25P60880 206 aa17.56■□□□□ 0.4
SMAD5-206ENST00000509962 NKX3-2P78367 333 aa17.56■□□□□ 0.4
SMAD5-206ENST00000509962 ANKRD45Q5TZF3 282 aa17.56■□□□□ 0.4
SMAD5-206ENST00000509962 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
SMAD5-206ENST00000509962 PRR12Q9ULL5 1215 aa17.56■□□□□ 0.4
SMAD5-206ENST00000509962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMAD5-206ENST00000509962 LAMA2P24043 3122 aaKnown RBP17.56■□□□□ 0.4
SMAD5-206ENST00000509962 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.55■□□□□ 0.4
SMAD5-206ENST00000509962 CTAGE5O15320 804 aa17.55■□□□□ 0.4
SMAD5-206ENST00000509962 DYNC1LI2O43237 492 aaPredicted RBP17.55■□□□□ 0.4
SMAD5-206ENST00000509962 NMT2O60551 498 aa17.55■□□□□ 0.4
SMAD5-206ENST00000509962 CABYRO75952 493 aa17.55■□□□□ 0.4
SMAD5-206ENST00000509962 CSF2RAP15509 400 aa17.55■□□□□ 0.4
SMAD5-206ENST00000509962 DNAJB2P25686 324 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms