RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 NUCB1Q02818 461 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 ACVR2BQ13705 512 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 TRIM60Q495X7 471 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 FRMPD3Q5JV73 1810 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 GPR153Q6NV75 609 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 ZNF589Q86UQ0 364 aaPredicted RBP14.79□□□□□ -0.04
PDPN-208ENST00000509009 RILPL2Q969X0 211 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 TCP11L1Q9NUJ3 509 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 PRKAG2Q9UGJ0 569 aa14.79□□□□□ -0.04
PDPN-208ENST00000509009 MYH4Q9Y623 1939 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 ADAMTS4O75173 837 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 SDSP20132 328 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 SNAP25P60880 206 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 CNTN2Q02246 1040 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 TLE2Q04725 743 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 IKQ13123 557 aaPredicted RBP14.78□□□□□ -0.04
PDPN-208ENST00000509009 KLHDC9Q8NEP7 349 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 LENG1Q96BZ8 264 aaPredicted RBP14.78□□□□□ -0.04
PDPN-208ENST00000509009 TSEN34Q9BSV6 310 aaKnown RBP14.78□□□□□ -0.04
PDPN-208ENST00000509009 ABHD16BQ9H3Z7 469 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 OSBPL3Q9H4L5 887 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 TOMM22Q9NS69 142 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 HOMER2Q9NSB8 354 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.78□□□□□ -0.04
PDPN-208ENST00000509009 PRR12Q9ULL5 1215 aa14.78□□□□□ -0.04
PDPN-208ENST00000509009 CCDC171Q6TFL3 1326 aa14.77□□□□□ -0.04
PDPN-208ENST00000509009 TRIM43BA6NCK2 446 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 POTEB2H3BUK9 544 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 DUSP11O75319 330 aaKnown RBP14.77□□□□□ -0.05
PDPN-208ENST00000509009 TKFCQ3LXA3 575 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
PDPN-208ENST00000509009 TTBK2Q6IQ55 1244 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 RASGRP2Q7LDG7 609 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 SH3RF1Q7Z6J0 888 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 FAM133AQ8N9E0 248 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 TRIM43Q96BQ3 446 aaPredicted RBP14.77□□□□□ -0.05
PDPN-208ENST00000509009 TRERF1Q96PN7 1200 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 TMEM47Q9BQJ4 181 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 ACAD9Q9H845 621 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 RNF146Q9NTX7 359 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 ZHX1Q9UKY1 873 aaPredicted RBP14.77□□□□□ -0.05
PDPN-208ENST00000509009 MTMR7Q9Y216 660 aa14.77□□□□□ -0.05
PDPN-208ENST00000509009 A0A1W2PQ45 241 aaPredicted RBP14.76□□□□□ -0.05
PDPN-208ENST00000509009 A0A1W2PQY0 241 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 SOWAHBA6NEL2 793 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 TOP1P11387 765 aaKnown RBP14.76□□□□□ -0.05
PDPN-208ENST00000509009 ALAS1P13196 640 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 ACLYP53396 1101 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 HAND2P61296 217 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 KCNA10Q16322 511 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 CCDC144BQ3MJ40 725 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 CCSAPQ6IQ19 270 aaPredicted RBP14.76□□□□□ -0.05
PDPN-208ENST00000509009 CCDC174Q6PII3 467 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 BTNL9Q6UXG8 535 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 ARMCX2Q7L311 632 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 CCDC144CPQ8IYA2 1237 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 DCAF4Q8WV16 495 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 TTC14Q96N46 770 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 KATNBL1Q9H079 304 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 A1CFQ9NQ94 594 aaKnown RBP14.76□□□□□ -0.05
PDPN-208ENST00000509009 PDLIM7Q9NR12 457 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 PLXNA1Q9UIW2 1896 aa14.76□□□□□ -0.05
PDPN-208ENST00000509009 ZMYM6O95789 1325 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 SYNRGQ9UMZ2 1314 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 ADCY6O43306 1168 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 SLC16A2P36021 539 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 IRX5P78411 483 aaPredicted RBP14.75□□□□□ -0.05
PDPN-208ENST00000509009 MUM1L1Q5H9M0 696 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 AKNAD1Q5T1N1 836 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 MFSD6Q6ZSS7 791 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 DEFB123Q8N688 67 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 BADQ92934 168 aa14.75□□□□□ -0.05
PDPN-208ENST00000509009 PRDM5Q9NQX1 630 aaPredicted RBP14.75□□□□□ -0.05
PDPN-208ENST00000509009 LAMA2P24043 3122 aaKnown RBP14.75□□□□□ -0.05
PDPN-208ENST00000509009 MYADML2A6NDP7 307 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 PCP11498 1178 aaKnown RBP14.74□□□□□ -0.05
PDPN-208ENST00000509009 ITGB8P26012 769 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 MFAP1P55081 439 aaKnown RBP14.74□□□□□ -0.05
PDPN-208ENST00000509009 GJA9P57773 515 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 CCDC96Q2M329 555 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 Q7L0L9 218 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 TBC1D10CQ8IV04 446 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 UPF3AQ9H1J1 476 aaKnown RBP14.74□□□□□ -0.05
PDPN-208ENST00000509009 GPCPD1Q9NPB8 672 aa14.74□□□□□ -0.05
PDPN-208ENST00000509009 MOXD2PA6NHM9 499 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 ASB14A6NK59 587 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 ICAM1P05362 532 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 CST5P28325 142 aaPredicted RBP14.73□□□□□ -0.05
PDPN-208ENST00000509009 SHHQ15465 462 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 SYDE2Q5VT97 1194 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 CWC27Q6UX04 472 aaKnown RBP14.73□□□□□ -0.05
PDPN-208ENST00000509009 ANKRD33Q7Z3H0 272 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 TOX2Q96NM4 488 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 RANBP17Q9H2T7 1088 aaKnown RBP14.73□□□□□ -0.05
PDPN-208ENST00000509009 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 MTMR10Q9NXD2 777 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 CYP39A1Q9NYL5 469 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 CCPG1Q9ULG6 757 aa14.73□□□□□ -0.05
PDPN-208ENST00000509009 A0A0C4DFX4 3053 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms