RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 DNAJC25-GNG10A0A024R161 153 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 GJA8P48165 433 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 SLC4A3P48751 1232 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 IKQ13123 557 aaPredicted RBP21.32■■□□□ 1
CLDND1-220ENST00000508902 ZNF792Q3KQV3 632 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 UBE2Q1Q7Z7E8 422 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 STAG2Q8N3U4 1231 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 NCOA7Q8NI08 942 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 UBAC1Q9BSL1 405 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 TMEM106CQ9BVX2 250 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 UBA5Q9GZZ9 404 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 KAT14Q9H8E8 782 aa21.32■■□□□ 1
CLDND1-220ENST00000508902 ALPK3Q96L96 1907 aa21.31■■□□□ 1
CLDND1-220ENST00000508902 FCER1AP12319 257 aa21.31■■□□□ 1
CLDND1-220ENST00000508902 MUM1L1Q5H9M0 696 aa21.31■■□□□ 1
CLDND1-220ENST00000508902 U2AF1L4Q8WU68 220 aaKnown RBP21.31■■□□□ 1
CLDND1-220ENST00000508902 MAML3Q96JK9 1138 aa21.31■■□□□ 1
CLDND1-220ENST00000508902 DEFB118Q96PH6 123 aa21.31■■□□□ 1
CLDND1-220ENST00000508902 CRISPLD2Q9H0B8 497 aa21.31■■□□□ 1
CLDND1-220ENST00000508902 HOMER2Q9NSB8 354 aa21.31■■□□□ 1
CLDND1-220ENST00000508902 ASTN1O14525 1302 aa21.3■■□□□ 1
CLDND1-220ENST00000508902 MNX1P50219 401 aaPredicted RBP21.3■■□□□ 1
CLDND1-220ENST00000508902 ADCK5Q3MIX3 580 aa21.3■■□□□ 1
CLDND1-220ENST00000508902 CCDC178Q5BJE1 867 aa21.3■■□□□ 1
CLDND1-220ENST00000508902 IFIT1BQ5T764 474 aaKnown RBP21.3■■□□□ 1
CLDND1-220ENST00000508902 OLFML2BQ68BL8 750 aa21.3■■□□□ 1
CLDND1-220ENST00000508902 LY9Q9HBG7 655 aa21.3■■□□□ 1
CLDND1-220ENST00000508902 RPTORQ8N122 1335 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 IFIT3O14879 490 aaKnown RBP21.29■■□□□ 1
CLDND1-220ENST00000508902 FDX1P10109 184 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 CYBAP13498 195 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 COPB2P35606 906 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 MLLT1Q03111 559 aaPredicted RBP21.29■■□□□ 1
CLDND1-220ENST00000508902 TRDNQ13061 729 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 RALYLQ86SE5 291 aaKnown RBP21.29■■□□□ 1
CLDND1-220ENST00000508902 DPP9Q86TI2 863 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 KCNB2Q92953 911 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 RNF146Q9NTX7 359 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 MAD2L2Q9UI95 211 aa21.29■■□□□ 1
CLDND1-220ENST00000508902 CEP290O15078 2479 aa21.28■■□□□ 1
CLDND1-220ENST00000508902 SGPL1O95470 568 aa21.28■■□□□ 1
CLDND1-220ENST00000508902 ICAM1P05362 532 aa21.28■■□□□ 1
CLDND1-220ENST00000508902 TROAPQ12815 778 aa21.28■■□□□ 1
CLDND1-220ENST00000508902 LHX8Q68G74 356 aa21.28■■□□□ 1
CLDND1-220ENST00000508902 TRMT44Q8IYL2 757 aaKnown RBP21.28■■□□□ 1
CLDND1-220ENST00000508902 LRRC2Q9BYS8 371 aa21.28■■□□□ 1
CLDND1-220ENST00000508902 A1CFQ9NQ94 594 aaKnown RBP21.28■■□□□ 1
CLDND1-220ENST00000508902 DDX49Q9Y6V7 483 aaKnown RBP21.28■■□□□ 1
CLDND1-220ENST00000508902 SH2B2O14492 632 aaPredicted RBP21.27■■□□□ 1
CLDND1-220ENST00000508902 PRC1O43663 620 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 ALAS1P13196 640 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 CNTN2Q02246 1040 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 KCTD2Q14681 263 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 PRAMEF19Q5SWL8 479 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 GPATCH4Q5T3I0 446 aaKnown RBP21.27■■□□□ 1
CLDND1-220ENST00000508902 CHST13Q8NET6 341 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 CLEC4DQ8WXI8 215 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 TRERF1Q96PN7 1200 aa21.27■■□□□ 1
CLDND1-220ENST00000508902 PURBQ96QR8 312 aaKnown RBP21.27■■□□□ 1
CLDND1-220ENST00000508902 HMX1Q9NP08 348 aaPredicted RBP21.27■■□□□ 1
CLDND1-220ENST00000508902 PALM3A6NDB9 673 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-220ENST00000508902 NFIBO00712 420 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 GRM4Q14833 912 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 TSGA10IPQ3SY00 556 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 ASPRV1Q53RT3 343 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 TMEM67Q5HYA8 995 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 ADGRF4Q8IZF3 695 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 DIS3LQ8TF46 1054 aaKnown RBP21.26■□□□□ 0.99
CLDND1-220ENST00000508902 TCEANC2Q96MN5 208 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 MYL10Q9BUA6 226 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 ACAD9Q9H845 621 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 CCPG1Q9ULG6 757 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 DNAH12Q6ZR08 3092 aa21.26■□□□□ 0.99
CLDND1-220ENST00000508902 PPP1R11O60927 126 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-220ENST00000508902 WTAPQ15007 396 aa21.25■□□□□ 0.99
CLDND1-220ENST00000508902 MFSD14CQ5VZR4 134 aa21.25■□□□□ 0.99
CLDND1-220ENST00000508902 CASC1Q6TDU7 716 aa21.25■□□□□ 0.99
CLDND1-220ENST00000508902 FAM133AQ8N9E0 248 aa21.25■□□□□ 0.99
CLDND1-220ENST00000508902 JMJD4Q9H9V9 463 aa21.25■□□□□ 0.99
CLDND1-220ENST00000508902 CTDP1Q9Y5B0 961 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-220ENST00000508902 SOWAHBA6NEL2 793 aa21.24■□□□□ 0.99
CLDND1-220ENST00000508902 CYTH3O43739 400 aa21.24■□□□□ 0.99
CLDND1-220ENST00000508902 PARP1P09874 1014 aaKnown RBP21.24■□□□□ 0.99
CLDND1-220ENST00000508902 HSPA4P34932 840 aa21.24■□□□□ 0.99
CLDND1-220ENST00000508902 EXOSC10Q01780 885 aaKnown RBP21.24■□□□□ 0.99
CLDND1-220ENST00000508902 CDC37Q16543 378 aaPredicted RBP21.24■□□□□ 0.99
CLDND1-220ENST00000508902 MTMR8Q96EF0 704 aa21.24■□□□□ 0.99
CLDND1-220ENST00000508902 DIS3Q9Y2L1 958 aaKnown RBP21.24■□□□□ 0.99
CLDND1-220ENST00000508902 WDR19Q8NEZ3 1342 aa21.24■□□□□ 0.99
CLDND1-220ENST00000508902 SNAI1O95863 264 aaPredicted RBP21.23■□□□□ 0.99
CLDND1-220ENST00000508902 CPA1P15085 419 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 QRICH1Q2TAL8 776 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 TKFCQ3LXA3 575 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 TINF2Q9BSI4 451 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 CYP39A1Q9NYL5 469 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 FBXO40Q9UH90 709 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 OGDHLQ9ULD0 1010 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 SNX14Q9Y5W7 946 aa21.23■□□□□ 0.99
CLDND1-220ENST00000508902 KLRF2D3W0D1 207 aa21.22■□□□□ 0.99
CLDND1-220ENST00000508902 ZNF865P0CJ78 1059 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms