RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 PDILTQ8N807 584 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 ANKRD7Q92527 254 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 TSC1Q92574 1164 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 CCDC94Q9BW85 323 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 GRIN3BO60391 1043 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 CDK11BP21127 795 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 TATDN1Q6P1N9 297 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 FCHSD1Q86WN1 690 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 PDCL2Q8N4E4 241 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 UBE2Q2Q8WVN8 375 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 DHX58Q96C10 678 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 NFE2L3Q9Y4A8 694 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 BMP6P22004 513 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 GNA11P29992 359 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 PRELPP51888 382 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 E4F1Q66K89 784 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 GPKOWQ92917 476 aaPredicted RBP eCLIP13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 MKL1Q969V6 931 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 LTBP3Q9NS15 1303 aa13.09□□□□□ -0.31
PRPF40B-203ENST00000508736 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 GPATCH4Q5T3I0 446 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 RSBN1LQ6PCB5 846 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 DPF2Q92785 391 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 GSDMAQ96QA5 445 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 DDTLA6NHG4 134 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 ZNF18P17022 549 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 LMNB1P20700 586 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 PTGDRQ13258 359 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 ZNF174Q15697 407 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 ZFPM1Q8IX07 1006 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 NIM1KQ8IY84 436 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 GRAMD1CQ8IYS0 662 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 JDP2Q8WYK2 163 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 GMLQ99445 158 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 C6orf50Q9HD87 102 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 NYAP2Q9P242 653 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
PRPF40B-203ENST00000508736 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 SYNRGQ9UMZ2 1314 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 LAD1O00515 517 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 WNT7AO00755 349 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 TXLNAP40222 546 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 ZNF543Q08ER8 600 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 NCBP1Q09161 790 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 ORC2Q13416 577 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 SPECC1LQ69YQ0 1117 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 KRT25Q7Z3Z0 450 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 SH3RF1Q7Z6J0 888 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 IQUBQ8NA54 791 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 PAGE5Q96GU1 130 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 KANSL2Q9H9L4 492 aa13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 CGNQ9P2M7 1197 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-203ENST00000508736 VWA3AA6NCI4 1184 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 ARHGAP6O43182 974 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 NAPAP54920 295 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 CERKLQ49MI3 558 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 LRRC47Q8N1G4 583 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 C4orf32Q8N8J7 132 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 PIGSQ96S52 555 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 TMX1Q9H3N1 280 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 ZNRF3Q9ULT6 936 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 SYNPO2Q9UMS6 1093 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 MTMR7Q9Y216 660 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 LONP1P36776 959 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 AFMP43652 599 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms