RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 HERVK_113P62684 666 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 PPP2R5BQ15173 497 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 CCDC96Q2M329 555 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 CCAR1Q8IX12 1150 aaKnown RBP26.06■■□□□ 1.76
SNCB-204ENST00000508006 C7orf61Q8IZ16 206 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 MB21D1Q8N884 522 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 SLC17A8Q8NDX2 589 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 BRF1Q92994 677 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 NUP88Q99567 741 aaPredicted RBP26.06■■□□□ 1.76
SNCB-204ENST00000508006 P2RX7Q99572 595 aaKnown RBP26.06■■□□□ 1.76
SNCB-204ENST00000508006 SLF1Q9BQI6 1058 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 PPP1R9AQ9ULJ8 1098 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 ADAMTS5Q9UNA0 930 aa26.06■■□□□ 1.76
SNCB-204ENST00000508006 TMEM232C9JQI7 657 aa26.05■■□□□ 1.76
SNCB-204ENST00000508006 CYP2B6P20813 491 aa26.05■■□□□ 1.76
SNCB-204ENST00000508006 KIF5BP33176 963 aa26.05■■□□□ 1.76
SNCB-204ENST00000508006 NEK4P51957 841 aa26.05■■□□□ 1.76
SNCB-204ENST00000508006 GRM4Q14833 912 aa26.05■■□□□ 1.76
SNCB-204ENST00000508006 RABEP1Q15276 862 aa26.05■■□□□ 1.76
SNCB-204ENST00000508006 APOA5Q6Q788 366 aa26.05■■□□□ 1.76
SNCB-204ENST00000508006 PALM3A6NDB9 673 aaPredicted RBP26.04■■□□□ 1.76
SNCB-204ENST00000508006 TOB2Q14106 344 aaPredicted RBP26.04■■□□□ 1.76
SNCB-204ENST00000508006 KCTD1Q719H9 257 aa26.04■■□□□ 1.76
SNCB-204ENST00000508006 CTCFLQ8NI51 663 aaPredicted RBP26.04■■□□□ 1.76
SNCB-204ENST00000508006 MTMR7Q9Y216 660 aa26.04■■□□□ 1.76
SNCB-204ENST00000508006 SPDYE16A6NNV3 312 aaPredicted RBP26.03■■□□□ 1.76
SNCB-204ENST00000508006 TRIM32Q13049 653 aa26.03■■□□□ 1.76
SNCB-204ENST00000508006 GPRC5AQ8NFJ5 357 aa26.03■■□□□ 1.76
SNCB-204ENST00000508006 NUDT12Q9BQG2 462 aa26.03■■□□□ 1.76
SNCB-204ENST00000508006 MORF4L1Q9UBU8 362 aa26.03■■□□□ 1.76
SNCB-204ENST00000508006 ZMYND8Q9ULU4 1186 aaPredicted RBP26.03■■□□□ 1.76
SNCB-204ENST00000508006 RABGAP1Q9Y3P9 1069 aa26.03■■□□□ 1.76
SNCB-204ENST00000508006 COL11A1P12107 1806 aaPredicted RBP26.02■■□□□ 1.76
SNCB-204ENST00000508006 KLF18A0A0U1RQI7 1052 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 ZBTB43O43298 467 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 SMARCA1P28370 1054 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 GNAQP50148 359 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 IKQ13123 557 aaPredicted RBP26.02■■□□□ 1.76
SNCB-204ENST00000508006 ZNF274Q96GC6 653 aaPredicted RBP26.02■■□□□ 1.76
SNCB-204ENST00000508006 LRCH3Q96II8 777 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 LZTS2Q9BRK4 669 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 C11orf49Q9H6J7 331 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 MAD2L2Q9UI95 211 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 BRPF3Q9ULD4 1205 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 ISY1Q9ULR0 285 aaKnown RBP26.02■■□□□ 1.76
SNCB-204ENST00000508006 NID2Q14112 1375 aa26.02■■□□□ 1.76
SNCB-204ENST00000508006 SOX1O00570 391 aaPredicted RBP26.01■■□□□ 1.75
SNCB-204ENST00000508006 APOBRQ0VD83 1088 aa26.01■■□□□ 1.75
SNCB-204ENST00000508006 FRMPD2Q68DX3 1309 aaPredicted RBP26.01■■□□□ 1.75
SNCB-204ENST00000508006 FANCBQ8NB91 859 aa26.01■■□□□ 1.75
SNCB-204ENST00000508006 NUP133Q8WUM0 1156 aa26.01■■□□□ 1.75
SNCB-204ENST00000508006 GPCPD1Q9NPB8 672 aa26.01■■□□□ 1.75
SNCB-204ENST00000508006 FBXO28Q9NVF7 368 aa26.01■■□□□ 1.75
SNCB-204ENST00000508006 RBM28Q9NW13 759 aaKnown RBP26.01■■□□□ 1.75
SNCB-204ENST00000508006 VWA5AO00534 786 aa26■■□□□ 1.75
SNCB-204ENST00000508006 RASGRP2Q7LDG7 609 aa26■■□□□ 1.75
SNCB-204ENST00000508006 TRIB2Q92519 343 aa26■■□□□ 1.75
SNCB-204ENST00000508006 CWC22Q9HCG8 908 aaKnown RBP26■■□□□ 1.75
SNCB-204ENST00000508006 CCDC196A0A1B0GTZ2 297 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 KLRF2D3W0D1 207 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 ZBED4O75132 1171 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 BMP8BP34820 402 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 OAZ1P54368 228 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 SYDE2Q5VT97 1194 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 MICU3Q86XE3 530 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 SOCS4Q8WXH5 440 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 KIFC2Q96AC6 838 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 ATG4CQ96DT6 458 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 GDF15Q99988 308 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 SLC38A10Q9HBR0 1119 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 RBPJLQ9UBG7 517 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 PNMA2Q9UL42 364 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 PRR12Q9ULL5 1215 aa25.99■■□□□ 1.75
SNCB-204ENST00000508006 ALPK3Q96L96 1907 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 ATP2A1O14983 1001 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 GOLGA8HP0CJ92 632 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 PRKAR2AP13861 404 aaKnown RBP25.98■■□□□ 1.75
SNCB-204ENST00000508006 SYN1P17600 705 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 MAPK4P31152 587 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 AK2P54819 239 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 TTBK2Q6IQ55 1244 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 TRMT44Q8IYL2 757 aaKnown RBP25.98■■□□□ 1.75
SNCB-204ENST00000508006 STAG2Q8N3U4 1231 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 MYL10Q9BUA6 226 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 OGDHLQ9ULD0 1010 aa25.98■■□□□ 1.75
SNCB-204ENST00000508006 GOLGA8BA8MQT2 603 aa25.97■■□□□ 1.75
SNCB-204ENST00000508006 DLL1O00548 723 aa25.97■■□□□ 1.75
SNCB-204ENST00000508006 ST18O60284 1047 aa25.97■■□□□ 1.75
SNCB-204ENST00000508006 PEX10O60683 326 aa25.97■■□□□ 1.75
SNCB-204ENST00000508006 XRCC5P13010 732 aaKnown RBP25.97■■□□□ 1.75
SNCB-204ENST00000508006 CHMP4CQ96CF2 233 aa25.97■■□□□ 1.75
SNCB-204ENST00000508006 PAGR1Q9BTK6 254 aa25.97■■□□□ 1.75
SNCB-204ENST00000508006 CTDP1Q9Y5B0 961 aaPredicted RBP25.97■■□□□ 1.75
SNCB-204ENST00000508006 PDIA3P30101 505 aaKnown RBP25.96■■□□□ 1.75
SNCB-204ENST00000508006 METAP2P50579 478 aaKnown RBP eCLIP25.96■■□□□ 1.75
SNCB-204ENST00000508006 ERVK-9P63128 1117 aa25.96■■□□□ 1.75
SNCB-204ENST00000508006 ERVK-24P63145 666 aa25.96■■□□□ 1.75
SNCB-204ENST00000508006 CCNA1P78396 465 aa25.96■■□□□ 1.75
SNCB-204ENST00000508006 RTN1Q16799 776 aa25.96■■□□□ 1.75
SNCB-204ENST00000508006 REPS2Q8NFH8 660 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms