RNA–Protein interactions for RNA: ENST00000505587.5

CCNH-205, Transcript of cyclin H, human

TSL 2

Gene CCNH, Length 1,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-205	ENST00000505587	MATN3	O15232	486 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	PWP1	Q13610	501 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	PAQR3	Q6TCH7	311 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	ADGRG2	Q8IZP9	1017 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	TMEM74	Q96NL1	305 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	JMJD8	Q96S16	334 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	FAN1	Q9Y2M0	1017 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	PLA2G1B	P04054	148 aa	Known RBP	4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	CYBB	P04839	570 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	GBP2	P32456	591 aa	Predicted RBP	4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	CNR2	P34972	360 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	SNAP47	Q5SQN1	464 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	SLC16A11	Q8NCK7	471 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	RHOV	Q96L33	236 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	RNF38	Q9H0F5	515 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	RNF19A	Q9NV58	838 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	GMIP	Q9P107	970 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587	MINPP1	Q9UNW1	487 aa		4.95	□□□□□ -1.62
CCNH-205	ENST00000505587		A0A1W2PQJ5	194 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	C1QTNF3-AMACR	E9PGA6	284 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587		F6X3S4	739 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	CLEC3A	O75596	197 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	FSHB	P01225	129 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	VAV1	P15498	845 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	HTRA3	P83110	453 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	MVK	Q03426	396 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	HLA-DQA1	Q5Y7H0	255 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	CPZ	Q66K79	652 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	ZNF526	Q8TF50	670 aa	Predicted RBP	4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	DDX1	Q92499	740 aa	Known RBP	4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	ARID3A	Q99856	593 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	RSRP1	Q9BUV0	290 aa		4.94	□□□□□ -1.62
CCNH-205	ENST00000505587	MEIS1	O00470	390 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	SRGAP3	O43295	1099 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	NOBOX	O60393	691 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	FBLN1	P23142	703 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	CCNF	P41002	786 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	CEBPA	P49715	358 aa	Predicted RBP	4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	GJA9	P57773	515 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	EAPP	Q56P03	285 aa	Predicted RBP	4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	CDCP2	Q5VXM1	449 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	GOLM1	Q8NBJ4	401 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	TMEM52	Q8NDY8	209 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	ANTXR1	Q9H6X2	564 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	AP5S1	Q9NUS5	200 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	DUSP10	Q9Y6W6	482 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	DBH	P09172	617 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	NCAM1	P13591	858 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	ATF2	P15336	505 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	PSMD2	Q13200	908 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	CWF19L2	Q2TBE0	894 aa	Known RBP	4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	JAML	Q86YT9	394 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	SORCS2	Q96PQ0	1159 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	LNPK	Q9C0E8	428 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	GFOD1	Q9NXC2	390 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	PRR13	Q9NZ81	148 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	FBXL21	Q9UKT6	434 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	PCDHB12	Q9Y5F1	795 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	IVNS1ABP	Q9Y6Y0	642 aa		4.93	□□□□□ -1.62
CCNH-205	ENST00000505587	FAM160A1	Q05DH4	1040 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	CARF	Q8N187	725 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	TTC9B	Q8N6N2	239 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	NAT16	Q8N8M0	369 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	SAMD11	Q96NU1	681 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	C1QTNF3	Q9BXJ4	246 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	PARP2	Q9UGN5	583 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	ROBO2	Q9HCK4	1378 aa		4.92	□□□□□ -1.62
CCNH-205	ENST00000505587	ATE1	O95260	518 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	GSN	P06396	782 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	CTSK	P43235	329 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	DAB2	P98082	770 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	BICRAL	Q6AI39	1079 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	FAM196A	Q6ZSG2	479 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	FBXO27	Q8NI29	283 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	MKRN2	Q9H000	416 aa	Known RBP	4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	CNNM2	Q9H8M5	875 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	DBR1	Q9UK59	544 aa	Known RBP	4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	PCDHB14	Q9Y5E9	798 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587		F8W031	263 aa	Predicted RBP	4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	OVOL3	O00110	214 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	POLR2B	P30876	1174 aa	Known RBP	4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	HMGA2	P52926	109 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	PDLIM7	Q9NR12	457 aa		4.91	□□□□□ -1.62
CCNH-205	ENST00000505587	MINDY4B	A8MYZ0	360 aa		4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	TLR3	O15455	904 aa	Known RBP	4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	CTSH	P09668	335 aa		4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	PRR5	P85299	388 aa		4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	DLX2	Q07687	328 aa	Predicted RBP	4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	RTP2	Q5QGT7	225 aa		4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	OVOS1	Q6IE37	1185 aa		4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	LOXL4	Q96JB6	756 aa		4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	HCFC2	Q9Y5Z7	792 aa		4.9	□□□□□ -1.62
CCNH-205	ENST00000505587	GSTM1	P09488	218 aa		4.89	□□□□□ -1.63
CCNH-205	ENST00000505587	ZNF20	P17024	532 aa		4.89	□□□□□ -1.63
CCNH-205	ENST00000505587	SARS	P49591	514 aa	Known RBP	4.89	□□□□□ -1.63
CCNH-205	ENST00000505587	XPC	Q01831	940 aa	Predicted RBP	4.89	□□□□□ -1.63
CCNH-205	ENST00000505587	CRTC3	Q6UUV7	619 aa		4.89	□□□□□ -1.63
CCNH-205	ENST00000505587	B3GNT8	Q7Z7M8	397 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms