RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 FCER1AP12319 257 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 CASP7P55210 303 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 GJA9P57773 515 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 NKX3-2P78367 333 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 SHC2P98077 582 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 LMOD3Q0VAK6 560 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 ITGA7Q13683 1181 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 DUSP27Q5VZP5 1158 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 ZC3H14Q6PJT7 736 aaKnown RBP5.31□□□□□ -1.56
CPNE4-204ENST00000505331 KSR2Q6VAB6 950 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 ZBTB33Q86T24 672 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 CCDC105Q8IYK2 499 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 UBALD2Q8IYN6 164 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 DCLK2Q8N568 766 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 MSL3Q8N5Y2 521 aaKnown RBP5.31□□□□□ -1.56
CPNE4-204ENST00000505331 C17orf80Q9BSJ5 609 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 PHF7Q9BWX1 381 aaPredicted RBP5.31□□□□□ -1.56
CPNE4-204ENST00000505331 SPATC1LQ9H0A9 340 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 UPF3AQ9H1J1 476 aaKnown RBP5.31□□□□□ -1.56
CPNE4-204ENST00000505331 DDX4Q9NQI0 724 aaKnown RBP5.31□□□□□ -1.56
CPNE4-204ENST00000505331 ZMIZ1Q9ULJ6 1067 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 CHMP3Q9Y3E7 222 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 FAM186AA6NE01 2351 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 CACNA1HO95180 2353 aa5.31□□□□□ -1.56
CPNE4-204ENST00000505331 FASNP49327 2511 aaKnown RBP5.31□□□□□ -1.56
CPNE4-204ENST00000505331 MROH5Q6ZUA9 1318 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 ASPMQ8IZT6 3477 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 RIF1Q5UIP0 2472 aaKnown RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 PI4KAP2A4QPH2 592 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 CYSRT1A8MQ03 144 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 TBX10O75333 385 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 PRDX5P30044 214 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 RIPK4P57078 832 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 WDR5P61964 334 aaKnown RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 HYAL1Q12794 435 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 PDAP1Q13442 181 aaKnown RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 MTMR3Q13615 1198 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 EPC2Q52LR7 807 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 PPM1JQ5JR12 505 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 PRR23BQ6ZRT6 265 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 NCAPG2Q86XI2 1143 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 CRACR2BQ8N4Y2 399 aaPredicted RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 ZGPATQ8N5A5 531 aaKnown RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 PI4KAP1Q8N8J0 262 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 CDCA7LQ96GN5 454 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 ZNF594Q96JF6 807 aaPredicted RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 MSLNLQ96KJ4 702 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 RPGRIP1Q96KN7 1286 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 YTHDC1Q96MU7 727 aaKnown RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 HS3ST6Q96QI5 342 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 KRTAP3-3Q9BYR6 98 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 KRTAP3-2Q9BYR7 98 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 MFSD1Q9H3U5 465 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 ANKFY1Q9P2R3 1169 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 LHX6Q9UPM6 363 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 INSL6Q9Y581 213 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 FAM208BQ5VWN6 2430 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 COL4A4P53420 1690 aaPredicted RBP5.3□□□□□ -1.56
CPNE4-204ENST00000505331 DOCK1Q14185 1865 aa5.3□□□□□ -1.56
CPNE4-204ENST00000505331 GRIN2DO15399 1336 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 PTPRFP10586 1907 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 FAM205CA6NFA0 338 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 TAF4O00268 1085 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 IQCF3P0C7M6 154 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 VCAM1P19320 739 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 PMLP29590 882 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 USP14P54578 494 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 FOXO4P98177 505 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 RING1Q06587 406 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 GPM6BQ13491 265 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 ZNF792Q3KQV3 632 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 CXCL17Q6UXB2 119 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 TMCO2Q7Z6W1 182 aaPredicted RBP5.29□□□□□ -1.56
CPNE4-204ENST00000505331 SLF2Q8IX21 1173 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 CRIPAKQ8N1N5 446 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 MB21D1Q8N884 522 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 DTWD2Q8NBA8 298 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 RETREG2Q8NC44 543 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 SMRP1Q8NCR6 262 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 FEZ1Q99689 392 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 CHMP4AQ9BY43 222 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 ALDH8A1Q9H2A2 487 aaPredicted RBP5.29□□□□□ -1.56
CPNE4-204ENST00000505331 MYH16Q9H6N6 1097 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 HOXC10Q9NYD6 342 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 ZHX1Q9UKY1 873 aaPredicted RBP5.29□□□□□ -1.56
CPNE4-204ENST00000505331 R4GN57 208 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 PHIPQ8WWQ0 1821 aa5.29□□□□□ -1.56
CPNE4-204ENST00000505331 SALL1Q9NSC2 1324 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 ZNF236Q9UL36 1845 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 CTAGE5O15320 804 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 ZEB2O60315 1214 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 EFCAB14O75071 495 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 MAP4K4O95819 1239 aaPredicted RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 SLC25A27O95847 323 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 SNAI1O95863 264 aaPredicted RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 PGK2P07205 417 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 CYP2C9P11712 490 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 ATF7P17544 494 aaPredicted RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 AOC1P19801 751 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 NDUFV1P49821 464 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms