RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 CCL15Q16663 113 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 SLC35G1Q2M3R5 365 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 GPATCH4Q5T3I0 446 aaKnown RBP10.79□□□□□ -0.68
TPM3-218ENST00000505010 KRT40Q6A162 431 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 KCTD1Q719H9 257 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 SCYL3Q8IZE3 742 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 FBXO18Q8NFZ0 1043 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 BRI3BPQ8WY22 251 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 CHAMP1Q96JM3 812 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 PICK1Q9NRD5 415 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 GINM1Q9NU53 330 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 SYNPO2Q9UMS6 1093 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 ATP6V1DQ9Y5K8 247 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 PTPRFP10586 1907 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 PARP14Q460N5 1801 aa10.79□□□□□ -0.68
TPM3-218ENST00000505010 A0A1W2PPC1 479 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 F5H6K3 240 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 GOLGA6L22H0YM25 854 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 CYTH3O43739 400 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 SCG2P13521 617 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 XBP1P17861 261 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 LACTBP83111 547 aaPredicted RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 KLRC3Q07444 240 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 GNL2Q13823 731 aaKnown RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 NBR1Q14596 966 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 SAFBQ15424 915 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM3-218ENST00000505010 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 PKN1Q16512 942 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 PFKFB3Q16875 520 aaPredicted RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 HOMER1Q86YM7 354 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 SPICE1Q8N0Z3 855 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.68
TPM3-218ENST00000505010 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 RRP36Q96EU6 259 aaKnown RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 GMCL1Q96IK5 515 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 NUP88Q99567 741 aaPredicted RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 UBA5Q9GZZ9 404 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 VPS54Q9P1Q0 977 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 SEC63Q9UGP8 760 aaKnown RBP10.78□□□□□ -0.68
TPM3-218ENST00000505010 ZNF112Q9UJU3 913 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 KCNJ14Q9UNX9 436 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 TMX2Q9Y320 296 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 UNC80Q8N2C7 3258 aa10.78□□□□□ -0.68
TPM3-218ENST00000505010 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 TLR2O60603 784 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 BMP3P12645 472 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 SMARCA1P28370 1054 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 MCM4P33991 863 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 SLC16A2P36021 539 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 IKQ13123 557 aaPredicted RBP10.77□□□□□ -0.69
TPM3-218ENST00000505010 MTFR1Q15390 333 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 TTBK2Q6IQ55 1244 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 HEATR3Q7Z4Q2 680 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 FAM43AQ8N2R8 423 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 RGS22Q8NE09 1264 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 SHISA4Q96DD7 197 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 PIGSQ96S52 555 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 ARHGAP39Q9C0H5 1083 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 ZSCAN16Q9H4T2 348 aaPredicted RBP10.77□□□□□ -0.69
TPM3-218ENST00000505010 VCPKMTQ9H867 229 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 AS3MTQ9HBK9 375 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 LOC285556D6RIA3 1793 aa10.77□□□□□ -0.69
TPM3-218ENST00000505010 KIF28PB7ZC32 967 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 SOX1O00570 391 aaPredicted RBP10.76□□□□□ -0.69
TPM3-218ENST00000505010 MMP1P03956 469 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 GJA8P48165 433 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 DNM1Q05193 864 aaKnown RBP10.76□□□□□ -0.69
TPM3-218ENST00000505010 NOL9Q5SY16 702 aaKnown RBP10.76□□□□□ -0.69
TPM3-218ENST00000505010 FAM83BQ5T0W9 1011 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 WWC2Q6AWC2 1192 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 FAM173BQ6P4H8 233 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 CLEC17AQ6ZS10 378 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPM3-218ENST00000505010 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 LRCH3Q96II8 777 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 RIOX1Q9H6W3 641 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 BRMS1Q9HCU9 246 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 CNPY2Q9Y2B0 182 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 CSADQ9Y600 493 aa10.76□□□□□ -0.69
TPM3-218ENST00000505010 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 TMEM232C9JQI7 657 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 FIBPO43427 364 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 EVI5O60447 810 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
TPM3-218ENST00000505010 GJB1P08034 283 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 PTPRAP18433 802 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 HOXD10P28358 340 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 KRT2P35908 639 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 NAPAP54920 295 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 NLRP5P59047 1200 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 MAP3K9P80192 1104 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 MTMR2Q13614 643 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 VGLL4Q14135 290 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 KIAA1755Q5JYT7 1200 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 SYDE2Q5VT97 1194 aa10.75□□□□□ -0.69
TPM3-218ENST00000505010 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms