RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 CABYRO75952 493 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 PGK1P00558 417 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 PFKMP08237 780 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 SHMT1P34896 483 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 GJA9P57773 515 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 SLFN5Q08AF3 891 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 TFCP2Q12800 502 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 CCDC85BQ15834 202 aaPredicted RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 MAPKAPK5Q8IW41 473 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 RPUSD2Q8IZ73 545 aaKnown RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 PHOSPHO2Q8TCD6 241 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 NECAB3Q96P71 396 aaPredicted RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 PA2G4Q9UQ80 394 aaKnown RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 CNPY2Q9Y2B0 182 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 YBX2Q9Y2T7 364 aaKnown RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 ZNFX1Q9P2E3 1918 aaKnown RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 A0A0G2JMZ2 1700 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 DNAJC25-GNG10A0A024R161 153 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 A0A1W2PRG0 241 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 CYP2E1P05181 493 aaPredicted RBP7.33□□□□□ -1.24
GYPB-204ENST00000504951 MRE11P49959 708 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 KCNQ1P51787 676 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 FOXK2Q01167 660 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 TFF2Q03403 129 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 RAB3GAP1Q15042 981 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 HLA-CQ95604 372 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 ZFRQ96KR1 1074 aaKnown RBP7.33□□□□□ -1.24
GYPB-204ENST00000504951 NKX2-4Q9H2Z4 354 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 SPC25Q9HBM1 224 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 TMX2Q9Y320 296 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.33□□□□□ -1.24
GYPB-204ENST00000504951 PRRC2BQ5JSZ5 2229 aaKnown RBP7.33□□□□□ -1.24
GYPB-204ENST00000504951 TRANK1O15050 2925 aa7.33□□□□□ -1.24
GYPB-204ENST00000504951 SYNRGQ9UMZ2 1314 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.32□□□□□ -1.24
GYPB-204ENST00000504951 ATP2A1O14983 1001 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 WDR46O15213 610 aaKnown RBP7.32□□□□□ -1.24
GYPB-204ENST00000504951 SNAI1O95863 264 aaPredicted RBP7.32□□□□□ -1.24
GYPB-204ENST00000504951 ASGR1P07306 291 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 CT47B1P0C2W7 299 aaPredicted RBP7.32□□□□□ -1.24
GYPB-204ENST00000504951 ALADP13716 330 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 TAL1P17542 331 aaPredicted RBP7.32□□□□□ -1.24
GYPB-204ENST00000504951 KCNC4Q03721 635 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 KCTD2Q14681 263 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 TMEM132BQ14DG7 1078 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 GORABQ5T7V8 394 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 PI16Q6UXB8 463 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 ADGRA1Q86SQ6 560 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 NCAPG2Q86XI2 1143 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 SIAH1Q8IUQ4 282 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 VWCEQ96DN2 955 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 NEUROD6Q96NK8 337 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 MMP19Q99542 508 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 ABHD16BQ9H3Z7 469 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 VCPKMTQ9H867 229 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 SLC4A7Q9Y6M7 1214 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 CDK5RAP2Q96SN8 1893 aa7.32□□□□□ -1.24
GYPB-204ENST00000504951 E9PSI1 815 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 CTAGE5O15320 804 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 SRGAP3O43295 1099 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 FLOT1O75955 427 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 GNAI3P08754 354 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 ACRP10323 421 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 STAT3P40763 770 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 SEPT2Q15019 361 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 ZYXQ15942 572 aaKnown RBP7.31□□□□□ -1.24
GYPB-204ENST00000504951 CCDC158Q5M9N0 1113 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 PPP2R2DQ66LE6 453 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 TMEM179Q6ZVK1 233 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
GYPB-204ENST00000504951 REPS2Q8NFH8 660 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 ARHGAP45Q92619 1136 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 CCDC17Q96LX7 622 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 SH2D4AQ9H788 454 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 SMC4Q9NTJ3 1288 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 KIAA1468Q9P260 1216 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 SWAP70Q9UH65 585 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 ZNF214Q9UL59 606 aaPredicted RBP7.31□□□□□ -1.24
GYPB-204ENST00000504951 Q9Y3F1 56 aa7.31□□□□□ -1.24
GYPB-204ENST00000504951 VWA5AO00534 786 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 ATP2A2P16615 1042 aaKnown RBP7.3□□□□□ -1.24
GYPB-204ENST00000504951 CYP2C18P33260 490 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 RFC2P35250 354 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 PLCD1P51178 756 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 NHLH1Q02575 133 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 ACVR2BQ13705 512 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 PUS10Q3MIT2 529 aaKnown RBP7.3□□□□□ -1.24
GYPB-204ENST00000504951 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 GNASQ5JWF2 1037 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 KIAA1755Q5JYT7 1200 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 FAM178BQ8IXR5 827 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 ATG4CQ96DT6 458 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 AGBL1Q96MI9 1066 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 SLC9A7Q96T83 725 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 MEIS3Q99687 375 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 NOC4LQ9BVI4 516 aaKnown RBP7.3□□□□□ -1.24
GYPB-204ENST00000504951 API5Q9BZZ5 524 aaKnown RBP7.3□□□□□ -1.24
GYPB-204ENST00000504951 HIPK3Q9H422 1215 aa7.3□□□□□ -1.24
GYPB-204ENST00000504951 SAP30BPQ9UHR5 308 aaKnown RBP7.3□□□□□ -1.24
GYPB-204ENST00000504951 PPP1R9AQ9ULJ8 1098 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms