RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 SLC4A3P48751 1232 aa23.59■■□□□ 1.37
HERC6-205ENST00000504905 COL9A3Q14050 684 aaPredicted RBP23.59■■□□□ 1.37
HERC6-205ENST00000504905 LY9Q9HBG7 655 aa23.59■■□□□ 1.37
HERC6-205ENST00000504905 SNX14Q9Y5W7 946 aa23.59■■□□□ 1.37
HERC6-205ENST00000504905 ZNFX1Q9P2E3 1918 aaKnown RBP23.59■■□□□ 1.37
HERC6-205ENST00000504905 ZNF236Q9UL36 1845 aa23.59■■□□□ 1.37
HERC6-205ENST00000504905 EIF5BO60841 1220 aaKnown RBP23.58■■□□□ 1.37
HERC6-205ENST00000504905 CYP2B6P20813 491 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 SNAP25P60880 206 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 MAP2K5Q13163 448 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 GRB14Q14449 540 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 CCDC174Q6PII3 467 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 CATIPQ7Z7H3 387 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 TMTC2Q8N394 836 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 PXYLP1Q8TE99 480 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 U2AF1L4Q8WU68 220 aaKnown RBP23.58■■□□□ 1.37
HERC6-205ENST00000504905 NR2E3Q9Y5X4 410 aa23.58■■□□□ 1.37
HERC6-205ENST00000504905 SH2B2O14492 632 aaPredicted RBP23.57■■□□□ 1.36
HERC6-205ENST00000504905 HMGB1P09429 215 aaKnown RBP23.57■■□□□ 1.36
HERC6-205ENST00000504905 CAPN2P17655 700 aa23.57■■□□□ 1.36
HERC6-205ENST00000504905 NFXL1Q6ZNB6 911 aa23.57■■□□□ 1.36
HERC6-205ENST00000504905 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
HERC6-205ENST00000504905 USP6NLQ92738 828 aa23.57■■□□□ 1.36
HERC6-205ENST00000504905 LRRC2Q9BYS8 371 aa23.57■■□□□ 1.36
HERC6-205ENST00000504905 RANBP17Q9H2T7 1088 aaKnown RBP23.57■■□□□ 1.36
HERC6-205ENST00000504905 GPHNQ9NQX3 736 aaPredicted RBP23.57■■□□□ 1.36
HERC6-205ENST00000504905 WDR19Q8NEZ3 1342 aa23.57■■□□□ 1.36
HERC6-205ENST00000504905 CCDC69A6NI79 296 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 SGPL1O95470 568 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 FCER1AP12319 257 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 XRCC5P13010 732 aaKnown RBP23.56■■□□□ 1.36
HERC6-205ENST00000504905 ELNP15502 786 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 LIFRP42702 1097 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 ABRAQ8N0Z2 381 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 JAKMIP1Q96N16 626 aaKnown RBP23.56■■□□□ 1.36
HERC6-205ENST00000504905 MMP19Q99542 508 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 APBA2Q99767 749 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 UBA5Q9GZZ9 404 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 UNC93B1Q9H1C4 597 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 RIPK3Q9Y572 518 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 ZNF536O15090 1300 aa23.56■■□□□ 1.36
HERC6-205ENST00000504905 FARP2O94887 1054 aaPredicted RBP23.55■■□□□ 1.36
HERC6-205ENST00000504905 ADORA2AP29274 412 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 KCTD2Q14681 263 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 GRM4Q14833 912 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 DPP9Q86TI2 863 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 ZNF654Q8IZM8 581 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 AGBL1Q96MI9 1066 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 CPVLQ9H3G5 476 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 GTF3C3Q9Y5Q9 886 aa23.55■■□□□ 1.36
HERC6-205ENST00000504905 EXOSC10Q01780 885 aaKnown RBP23.54■■□□□ 1.36
HERC6-205ENST00000504905 TROAPQ12815 778 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 TRMT44Q8IYL2 757 aaKnown RBP23.54■■□□□ 1.36
HERC6-205ENST00000504905 STAG2Q8N3U4 1231 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 CHST13Q8NET6 341 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 NUP133Q8WUM0 1156 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 TCEANC2Q96MN5 208 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 HOMER2Q9NSB8 354 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 FBXO40Q9UH90 709 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 MAD2L2Q9UI95 211 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 CCPG1Q9ULG6 757 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 MYH6P13533 1939 aa23.54■■□□□ 1.36
HERC6-205ENST00000504905 PALM3A6NDB9 673 aaPredicted RBP23.53■■□□□ 1.36
HERC6-205ENST00000504905 KLRF2D3W0D1 207 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 DHX16O60231 1041 aaKnown RBP23.53■■□□□ 1.36
HERC6-205ENST00000504905 DDAH1O94760 285 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 ICAM1P05362 532 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 ALAS1P13196 640 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 PSMA5P28066 241 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 TKFCQ3LXA3 575 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 BLOC1S2Q6QNY1 142 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 SLC5A4Q9NY91 659 aa23.53■■□□□ 1.36
HERC6-205ENST00000504905 PLXNA1Q9UIW2 1896 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 HMGCRP04035 888 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 INHAP05111 366 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 HOXC6P09630 235 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 ADGRF4Q8IZF3 695 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 TRIB2Q92519 343 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 MYL10Q9BUA6 226 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 RNF146Q9NTX7 359 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 PNMA2Q9UL42 364 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 SLC12A7Q9Y666 1083 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 SMCHD1A6NHR9 2005 aa23.52■■□□□ 1.36
HERC6-205ENST00000504905 A0A1W2PPC1 479 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 CPA1P15085 419 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 CASTP20810 708 aaKnown RBP23.51■■□□□ 1.35
HERC6-205ENST00000504905 FGD1P98174 961 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 SGMS1Q86VZ5 419 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 CTCFLQ8NI51 663 aaPredicted RBP23.51■■□□□ 1.35
HERC6-205ENST00000504905 TRERF1Q96PN7 1200 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 MAP3K14Q99558 947 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 ACAD9Q9H845 621 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 VAT1LQ9HCJ6 419 aa23.51■■□□□ 1.35
HERC6-205ENST00000504905 COBLO75128 1261 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 CALM1P0DP23 149 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 CALM2P0DP24 149 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 CALM3P0DP25 149 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 KIF5BP33176 963 aa23.5■■□□□ 1.35
HERC6-205ENST00000504905 CDC37Q16543 378 aaPredicted RBP23.5■■□□□ 1.35
HERC6-205ENST00000504905 CCL14Q16627 93 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms