RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FGD4Q96M96 766 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 MTRQ99707 1265 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 FZD9O00144 591 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 AP1G1O43747 822 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 AHCYL1O43865 530 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 RFPL3O75679 317 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 PIK3R6Q5UE93 754 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 VPS53Q5VIR6 699 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 OVOS1Q6IE37 1185 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 ABHD17CQ6PCB6 329 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 PGM2L1Q6PCE3 622 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 ADAMTSL4Q6UY14 1074 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 NBPF15Q8N660 670 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 ANKK1Q8NFD2 765 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 PUS7LQ9H0K6 701 aaKnown RBP6.16□□□□□ -1.42
NIPBL-204ENST00000504430 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 XPOTO43592 962 aaKnown RBP6.15□□□□□ -1.42
NIPBL-204ENST00000504430 SELPP16109 830 aa6.15□□□□□ -1.42
NIPBL-204ENST00000504430 CDCA2Q69YH5 1023 aaPredicted RBP6.15□□□□□ -1.42
NIPBL-204ENST00000504430 CXorf57Q6NSI4 855 aaKnown RBP6.15□□□□□ -1.42
NIPBL-204ENST00000504430 CCDC129Q6ZRS4 1044 aa6.15□□□□□ -1.42
NIPBL-204ENST00000504430 RAB44Q7Z6P3 723 aaPredicted RBP6.15□□□□□ -1.42
NIPBL-204ENST00000504430 PPM1KQ8N3J5 372 aa6.15□□□□□ -1.42
NIPBL-204ENST00000504430 SNRNP27Q8WVK2 155 aaKnown RBP6.15□□□□□ -1.42
NIPBL-204ENST00000504430 C14orf119Q9NWQ9 140 aa6.15□□□□□ -1.42
NIPBL-204ENST00000504430 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 C6orf222P0C671 652 aaPredicted RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 KCNA2P16389 499 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 CPEP16870 476 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 MRE11P49959 708 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 CFAP100Q494V2 611 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 CCDC30Q5VVM6 783 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 CENPTQ96BT3 561 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 SGCZQ96LD1 299 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 SLC4A5Q9BY07 1137 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 LRP2BPQ9P2M1 347 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 GTPBP10A4D1E9 387 aaKnown RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHGA12O60330 932 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 EDN3P14138 238 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 BMP6P22004 513 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 GRIK1P39086 918 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PDE1CQ14123 709 aaPredicted RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 FNDC3BQ53EP0 1204 aaKnown RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 NUGGCQ68CJ6 796 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 GPR155Q7Z3F1 870 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 HEATR4Q86WZ0 1026 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 REXO1Q8N1G1 1221 aaKnown RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 GIMAP8Q8ND71 665 aaPredicted RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 VMP1Q96GC9 406 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 ZNF830Q96NB3 372 aaPredicted RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 TBCBQ99426 244 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 H2AFY2Q9P0M6 372 aaPredicted RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHGA7Q9Y5G6 932 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHGA6Q9Y5G7 932 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHGA3Q9Y5H0 932 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHGA2Q9Y5H1 932 aa6.15□□□□□ -1.43
NIPBL-204ENST00000504430 E2F8A0AVK6 867 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 PRODHO43272 600 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 APBA3O96018 575 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 ATP4AP20648 1035 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 SLFN12Q8IYM2 578 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 C7orf61Q8IZ16 206 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 RCAN3Q9UKA8 241 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 PPP1R9AQ9ULJ8 1098 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 LCHNA4D1U4 455 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 F8W031 263 aaPredicted RBP6.14□□□□□ -1.43
NIPBL-204ENST00000504430 TPP1O14773 563 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 HTR3BO95264 441 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 EPHX1P07099 455 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 COPAP53621 1224 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 TYRO3Q06418 890 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 SWSAP1Q6NVH7 229 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 PLBD1Q6P4A8 553 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 NLRP8Q86W28 1048 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 RBBP8NLQ8NC74 664 aaPredicted RBP6.14□□□□□ -1.43
NIPBL-204ENST00000504430 RPGRQ92834 1020 aaKnown RBP6.14□□□□□ -1.43
NIPBL-204ENST00000504430 ACO2Q99798 780 aaKnown RBP6.14□□□□□ -1.43
NIPBL-204ENST00000504430 IFT22Q9H7X7 185 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 CRYL1Q9Y2S2 319 aa6.14□□□□□ -1.43
NIPBL-204ENST00000504430 TMCC2O75069 709 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 SLC4A1P02730 911 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 NKAIN3Q8N8D7 197 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 LSMEM1Q8N8F7 131 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 LRRN4CLQ8ND94 238 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 ATP6V1E2Q96A05 226 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 MAFFQ9ULX9 164 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 RRN3P2A6NIE6 340 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 ITGAVP06756 1048 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 PHKG2P15735 406 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 IL2P60568 153 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 CLUL1Q15846 466 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 DDB1Q16531 1140 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 GPR158Q5T848 1215 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 GGT6Q6P531 493 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 TAB3Q8N5C8 712 aaPredicted RBP6.13□□□□□ -1.43
NIPBL-204ENST00000504430 NAT8LQ8N9F0 302 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 FAM156AQ8NDB6 213 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms