RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 ZNF18P17022 549 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 BMP6P22004 513 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 RBM5P52756 815 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL1A1-210ENST00000504289 UBASH3AP57075 661 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 TGFB2P61812 414 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 AOC3Q16853 763 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 INF2Q27J81 1249 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
COL1A1-210ENST00000504289 SPATA1Q5VX52 437 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 RSBN1LQ6PCB5 846 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-210ENST00000504289 PDILTQ8N807 584 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 CUL5Q93034 780 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 CTAGE1Q96RT6 745 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 GMLQ99445 158 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 MXD3Q9BW11 206 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
COL1A1-210ENST00000504289 HSD3B7Q9H2F3 369 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 JMJD4Q9H9V9 463 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 DISC1Q9NRI5 854 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 IFNKQ9P0W0 207 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 KIF13BQ9NQT8 1826 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-210ENST00000504289 CCP110O43303 1012 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 TBC1D12O60347 775 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 SERPINC1P01008 464 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 STAT6P42226 847 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL1A1-210ENST00000504289 AMPD3Q01432 767 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 SPAG1Q07617 926 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 IL17AQ16552 155 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 CFAP100Q494V2 611 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 RRAGBQ5VZM2 374 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 MOXD1Q6UVY6 613 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 ADGRF4Q8IZF3 695 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 OGFOD1Q8N543 542 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
COL1A1-210ENST00000504289 FAM151AQ8WW52 585 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 CCDC47Q96A33 483 aaKnown RBP11.08□□□□□ -0.64
COL1A1-210ENST00000504289 ZNF830Q96NB3 372 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-210ENST00000504289 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
COL1A1-210ENST00000504289 MYH4Q9Y623 1939 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 DDTLA6NHG4 134 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 MPHOSPH10O00566 681 aaKnown RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 FOXN1O15353 648 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 C21orf2O43822 256 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 SFPQP23246 707 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 LMOD1P29536 600 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 CLK2P49760 499 aaKnown RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 USP11P51784 963 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 AP3B2Q13367 1082 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 CUL4BQ13620 913 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 TMEM266Q2M3C6 531 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 CCDC144BQ3MJ40 725 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 COBLL1Q53SF7 1204 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 RBM26Q5T8P6 1007 aaKnown RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 ZNF658Q5TYW1 1059 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 FAM83AQ86UY5 434 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 HOMER1Q86YM7 354 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 VSTM4Q8IW00 320 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 LRRC47Q8N1G4 583 aaKnown RBP11.07□□□□□ -0.64
COL1A1-210ENST00000504289 IGSF22Q8N9C0 903 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 TBCKQ8TEA7 893 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 MTMR9Q96QG7 549 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 UBA5Q9GZZ9 404 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 VAT1LQ9HCJ6 419 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 KCNQ5Q9NR82 932 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 GINM1Q9NU53 330 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 KBTBD4Q9NVX7 518 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 FANCLQ9NW38 375 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 STK17AQ9UEE5 414 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 NRBP1Q9UHY1 535 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 RWDD2AQ9UIY3 292 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 ZNRF3Q9ULT6 936 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 NFE2L3Q9Y4A8 694 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 STK24Q9Y6E0 443 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 SIPA1L1O43166 1804 aa11.07□□□□□ -0.64
COL1A1-210ENST00000504289 A0A087WWV3 80 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 LRRC10BA6NIK2 292 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 YDJCA8MPS7 323 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
COL1A1-210ENST00000504289 PLA2G6O60733 806 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 FOSP01100 380 aaPredicted RBP11.06□□□□□ -0.64
COL1A1-210ENST00000504289 SKILP12757 684 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 EEF2P13639 858 aaKnown RBP11.06□□□□□ -0.64
COL1A1-210ENST00000504289 SLC1A4P43007 532 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 AFMP43652 599 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 ICA1Q05084 483 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 STIM1Q13586 685 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 DLGAP5Q15398 846 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 CCDC96Q2M329 555 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 LETM2Q2VYF4 491 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms