RNA–Protein interactions for RNA: ENST00000504121.5

SLC1A3-205, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-205ENST00000504121 TRIM60Q495X7 471 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 CCSAPQ6IQ19 270 aaPredicted RBP11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 CTR9Q6PD62 1173 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 GMCL1P1Q8NEA9 526 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 GPATCH3Q96I76 525 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 GLT1D1Q96MS3 346 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 UPF3AQ9H1J1 476 aaKnown RBP11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
SLC1A3-205ENST00000504121 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.56
SLC1A3-205ENST00000504121 A0A1W2PQ45 241 aaPredicted RBP11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 A0A1W2PQY0 241 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 F5H6K3 240 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 ZBED4O75132 1171 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 TIMP1P01033 207 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 ACLYP53396 1101 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 GJA9P57773 515 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 FPGSQ05932 587 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 KLRC3Q07444 240 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 PPIGQ13427 754 aaKnown RBP eCLIP11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 FAM47AQ5JRC9 791 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 KIAA1755Q5JYT7 1200 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 RCSD1Q6JBY9 416 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 MFSD5Q6N075 450 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 APPBP2Q92624 585 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 BADQ92934 168 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 DDX11Q96FC9 970 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 CDX2Q99626 313 aaPredicted RBP11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 MTIF3Q9H2K0 278 aaKnown RBP11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 ARMT1Q9H993 441 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 SLC38A10Q9HBR0 1119 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 ECHDC1Q9NTX5 307 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 NDUFB9Q9Y6M9 179 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 SLC4A4Q9Y6R1 1079 aa11.52□□□□□ -0.57
SLC1A3-205ENST00000504121 GREB1LQ9C091 1923 aaPredicted RBP11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 IGKV6D-41A0A0C4DH26 115 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 TRIM43BA6NCK2 446 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 SLC3A2P08195 630 aaKnown RBP11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 RASA1P20936 1047 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 AKNAD1Q5T1N1 836 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 RASIP1Q5U651 963 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 SLC44A5Q8NCS7 719 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 TRIM43Q96BQ3 446 aaPredicted RBP11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 COL25A1Q9BXS0 654 aaPredicted RBP11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 BOLA2Q9H3K6 86 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 MKNK2Q9HBH9 465 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 STARD7Q9NQZ5 370 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 TMEM39AQ9NV64 488 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 TBX21Q9UL17 535 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 TTC28Q96AY4 2481 aa11.51□□□□□ -0.57
SLC1A3-205ENST00000504121 ASB14A6NK59 587 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 TLR3O15455 904 aaKnown RBP11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 SNAI1O95863 264 aaPredicted RBP11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 TTLL1O95922 423 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 BRD2P25440 801 aaKnown RBP11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 PDE4BQ07343 736 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 FAAP100Q0VG06 881 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 PSRC1Q6PGN9 363 aaPredicted RBP11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 SPICE1Q8N0Z3 855 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 TMEM199Q8N511 208 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 MAFAQ8NHW3 353 aaPredicted RBP11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 PANK1Q8TE04 598 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 DYNLL2Q96FJ2 89 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 GMCL1Q96IK5 515 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 RNPC3Q96LT9 517 aaKnown RBP11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 MTMR4Q9NYA4 1195 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 TTC41PQ6P2S7 1318 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 MYH7P12883 1935 aa11.5□□□□□ -0.57
SLC1A3-205ENST00000504121 PLXNA1Q9UIW2 1896 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 A0A0U1RQG5 324 aaPredicted RBP11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 GSG1L2A8MUP6 293 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 PRKAB2O43741 272 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 ZEB2O60315 1214 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 ACVR2BQ13705 512 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 C9orf50Q5SZB4 431 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 SLC43A3Q8NBI5 491 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 NEDD1Q8NHV4 660 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 PUS7LQ9H0K6 701 aaKnown RBP11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 PRDM5Q9NQX1 630 aaPredicted RBP11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 SYNRGQ9UMZ2 1314 aa11.49□□□□□ -0.57
SLC1A3-205ENST00000504121 NCOR1O75376 2440 aa11.48□□□□□ -0.57
SLC1A3-205ENST00000504121 LAMA2P24043 3122 aaKnown RBP11.48□□□□□ -0.57
SLC1A3-205ENST00000504121 ARVCFO00192 962 aa11.48□□□□□ -0.57
SLC1A3-205ENST00000504121 ERC2O15083 957 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms