RNA–Protein interactions for RNA: ENST00000504020.2

CCDC110-203, Transcript of coiled-coil domain containing 110, humanhuman

TSL 5

Gene CCDC110, Length 470 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-203ENST00000504020 NSUN3Q9H649 340 aaKnown RBP6.35□□□□□ -1.39
CCDC110-203ENST00000504020 RBPJLQ9UBG7 517 aa6.35□□□□□ -1.39
CCDC110-203ENST00000504020 USP18Q9UMW8 372 aa6.35□□□□□ -1.39
CCDC110-203ENST00000504020 TTF2Q9UNY4 1162 aaKnown RBP6.35□□□□□ -1.39
CCDC110-203ENST00000504020 GPSM3Q9Y4H4 160 aa6.35□□□□□ -1.39
CCDC110-203ENST00000504020 ARVCFO00192 962 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 PI15O43692 258 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 TBX10O75333 385 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 ACTN1P12814 892 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 IL1R1P14778 569 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 INSM1Q01101 510 aaPredicted RBP6.34□□□□□ -1.39
CCDC110-203ENST00000504020 CCDC152Q4G0S7 254 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 C6orf132Q5T0Z8 1188 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 ZNF605Q86T29 641 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 GATA6Q92908 595 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 EMID1Q96A84 441 aaPredicted RBP6.34□□□□□ -1.39
CCDC110-203ENST00000504020 PHF7Q9BWX1 381 aaPredicted RBP6.34□□□□□ -1.39
CCDC110-203ENST00000504020 CWC22Q9HCG8 908 aaKnown RBP6.34□□□□□ -1.39
CCDC110-203ENST00000504020 TMOD2Q9NZR1 351 aa6.34□□□□□ -1.39
CCDC110-203ENST00000504020 DBF4Q9UBU7 674 aaPredicted RBP6.34□□□□□ -1.39
CCDC110-203ENST00000504020 ZNFX1Q9P2E3 1918 aaKnown RBP6.34□□□□□ -1.39
CCDC110-203ENST00000504020 ATAD5Q96QE3 1844 aa6.34□□□□□ -1.4
CCDC110-203ENST00000504020 MYH3P11055 1940 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 NOTCH2Q04721 2471 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 LINC01553A4QN01 128 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 FAM187AA6NFU0 413 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 J3QKU1 62 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 KINO60870 393 aaKnown RBP6.33□□□□□ -1.4
CCDC110-203ENST00000504020 ADAMTS4O75173 837 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 C1QL1O75973 258 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 ARP10275 920 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 HERVK_113P62684 666 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 MTMR3Q13615 1198 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 GRB14Q14449 540 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 PRAMEF19Q5SWL8 479 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 CCSAPQ6IQ19 270 aaPredicted RBP6.33□□□□□ -1.4
CCDC110-203ENST00000504020 ZBTB33Q86T24 672 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 FAM151AQ8WW52 585 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 BORCS6Q96GS4 357 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 SCLYQ96I15 445 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 MSLNLQ96KJ4 702 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 RPGRIP1Q96KN7 1286 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 RTP3Q9BQQ7 232 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 NOC4LQ9BVI4 516 aaKnown RBP6.33□□□□□ -1.4
CCDC110-203ENST00000504020 CLMPQ9H6B4 373 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 AAASQ9NRG9 546 aa6.33□□□□□ -1.4
CCDC110-203ENST00000504020 CELSR3Q9NYQ7 3312 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 A0A0U1RQG5 324 aaPredicted RBP6.32□□□□□ -1.4
CCDC110-203ENST00000504020 WIPF1O43516 503 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 BRD1O95696 1058 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 PRB1P04280 392 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 SP9P0CG40 484 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 SLC19A1P41440 591 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 IRX3P78415 501 aaPredicted RBP6.32□□□□□ -1.4
CCDC110-203ENST00000504020 NFX1Q12986 1120 aaKnown RBP6.32□□□□□ -1.4
CCDC110-203ENST00000504020 KCNA10Q16322 511 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 RTL5Q5HYW3 569 aaPredicted RBP6.32□□□□□ -1.4
CCDC110-203ENST00000504020 C19orf48Q6RUI8 117 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 SMRP1Q8NCR6 262 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 KREMEN2Q8NCW0 462 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 FLCNQ8NFG4 579 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 FAM84BQ96KN1 310 aaPredicted RBP6.32□□□□□ -1.4
CCDC110-203ENST00000504020 AGBL1Q96MI9 1066 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 GLT1D1Q96MS3 346 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 THUMPD2Q9BTF0 503 aaKnown RBP6.32□□□□□ -1.4
CCDC110-203ENST00000504020 PARD6AQ9NPB6 346 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 RXFP3Q9NSD7 469 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 SORCS3Q9UPU3 1222 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 NDUFB9Q9Y6M9 179 aa6.32□□□□□ -1.4
CCDC110-203ENST00000504020 ROBO3Q96MS0 1386 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 POLQO75417 2590 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.31□□□□□ -1.4
CCDC110-203ENST00000504020 HOXD8P13378 290 aaPredicted RBP6.31□□□□□ -1.4
CCDC110-203ENST00000504020 NPR3P17342 541 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 HOXA7P31268 230 aaPredicted RBP6.31□□□□□ -1.4
CCDC110-203ENST00000504020 GGCXP38435 758 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 HMGCS2P54868 508 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 RRP1P56182 461 aaKnown RBP6.31□□□□□ -1.4
CCDC110-203ENST00000504020 PDIA6Q15084 440 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 COL28A1Q2UY09 1125 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 MFSD14BQ5SR56 506 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 KLHDC9Q8NEP7 349 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 RIN2Q8WYP3 895 aaPredicted RBP6.31□□□□□ -1.4
CCDC110-203ENST00000504020 CDC5LQ99459 802 aaKnown RBP6.31□□□□□ -1.4
CCDC110-203ENST00000504020 C17orf80Q9BSJ5 609 aa6.31□□□□□ -1.4
CCDC110-203ENST00000504020 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.31□□□□□ -1.4
CCDC110-203ENST00000504020 DOPEY2Q9Y3R5 2298 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 TANC1Q9C0D5 1861 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 CTNND1O60716 968 aaKnown RBP6.3□□□□□ -1.4
CCDC110-203ENST00000504020 HSP90B1P14625 803 aaKnown RBP6.3□□□□□ -1.4
CCDC110-203ENST00000504020 PRR20EP86478 221 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 PRR20CP86479 221 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 PRR20DP86480 221 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 PRR20BP86481 221 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 PRR20AP86496 221 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 HDLBPQ00341 1268 aaKnown RBP6.3□□□□□ -1.4
CCDC110-203ENST00000504020 HYAL1Q12794 435 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 COASYQ13057 564 aa6.3□□□□□ -1.4
CCDC110-203ENST00000504020 RRP1BQ14684 758 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms