RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 AGBL1Q96MI9 1066 aa26.01■■□□□ 1.75
LSM6-203ENST00000503982 RNF146Q9NTX7 359 aa26.01■■□□□ 1.75
LSM6-203ENST00000503982 SYNGAP1Q96PV0 1343 aa26■■□□□ 1.75
LSM6-203ENST00000503982 PGK1P00558 417 aa26■■□□□ 1.75
LSM6-203ENST00000503982 SLC39A5Q6ZMH5 540 aa26■■□□□ 1.75
LSM6-203ENST00000503982 RASGRP2Q7LDG7 609 aa26■■□□□ 1.75
LSM6-203ENST00000503982 MSL3Q8N5Y2 521 aaKnown RBP26■■□□□ 1.75
LSM6-203ENST00000503982 DCAF4Q8WV16 495 aa26■■□□□ 1.75
LSM6-203ENST00000503982 OSBPL3Q9H4L5 887 aa26■■□□□ 1.75
LSM6-203ENST00000503982 PRDM5Q9NQX1 630 aaPredicted RBP26■■□□□ 1.75
LSM6-203ENST00000503982 FAM184BQ9ULE4 1060 aa26■■□□□ 1.75
LSM6-203ENST00000503982 ZMYM6O95789 1325 aa25.99■■□□□ 1.75
LSM6-203ENST00000503982 POTEB2H3BUK9 544 aa25.99■■□□□ 1.75
LSM6-203ENST00000503982 HIP1O00291 1037 aa25.99■■□□□ 1.75
LSM6-203ENST00000503982 ZNF865P0CJ78 1059 aaPredicted RBP25.99■■□□□ 1.75
LSM6-203ENST00000503982 IRX6P78412 446 aaPredicted RBP25.99■■□□□ 1.75
LSM6-203ENST00000503982 AKNAD1Q5T1N1 836 aa25.99■■□□□ 1.75
LSM6-203ENST00000503982 LENG1Q96BZ8 264 aaPredicted RBP25.99■■□□□ 1.75
LSM6-203ENST00000503982 TRERF1Q96PN7 1200 aa25.99■■□□□ 1.75
LSM6-203ENST00000503982 RNF41Q9H4P4 317 aaPredicted RBP25.99■■□□□ 1.75
LSM6-203ENST00000503982 PRR12Q9ULL5 1215 aa25.99■■□□□ 1.75
LSM6-203ENST00000503982 FRMPD2Q68DX3 1309 aaPredicted RBP25.98■■□□□ 1.75
LSM6-203ENST00000503982 DNAJC25-GNG10A0A024R161 153 aa25.98■■□□□ 1.75
LSM6-203ENST00000503982 ZNF213O14771 459 aa25.98■■□□□ 1.75
LSM6-203ENST00000503982 TOP1P11387 765 aaKnown RBP25.98■■□□□ 1.75
LSM6-203ENST00000503982 TKFCQ3LXA3 575 aa25.97■■□□□ 1.75
LSM6-203ENST00000503982 TRIM60Q495X7 471 aa25.97■■□□□ 1.75
LSM6-203ENST00000503982 ZNF467Q7Z7K2 595 aaPredicted RBP25.97■■□□□ 1.75
LSM6-203ENST00000503982 TDHQ8IZJ6 230 aa25.97■■□□□ 1.75
LSM6-203ENST00000503982 TMEM47Q9BQJ4 181 aa25.97■■□□□ 1.75
LSM6-203ENST00000503982 GPCPD1Q9NPB8 672 aa25.97■■□□□ 1.75
LSM6-203ENST00000503982 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.97■■□□□ 1.75
LSM6-203ENST00000503982 CCPG1Q9ULG6 757 aa25.97■■□□□ 1.75
LSM6-203ENST00000503982 LAMA4Q16363 1823 aa25.97■■□□□ 1.75
LSM6-203ENST00000503982 DNAH12Q6ZR08 3092 aa25.96■■□□□ 1.75
LSM6-203ENST00000503982 PLA2G6O60733 806 aa25.96■■□□□ 1.75
LSM6-203ENST00000503982 SNAI1O95863 264 aaPredicted RBP25.96■■□□□ 1.75
LSM6-203ENST00000503982 FGRP09769 529 aa25.96■■□□□ 1.75
LSM6-203ENST00000503982 SLC16A2P36021 539 aa25.96■■□□□ 1.75
LSM6-203ENST00000503982 ACVR2BQ13705 512 aa25.96■■□□□ 1.75
LSM6-203ENST00000503982 CNTN2Q02246 1040 aa25.95■■□□□ 1.74
LSM6-203ENST00000503982 TTBK2Q6IQ55 1244 aa25.95■■□□□ 1.74
LSM6-203ENST00000503982 MAMDC4Q6UXC1 1216 aa25.95■■□□□ 1.74
LSM6-203ENST00000503982 ARMCX2Q7L311 632 aa25.95■■□□□ 1.74
LSM6-203ENST00000503982 TBC1D10CQ8IV04 446 aa25.95■■□□□ 1.74
LSM6-203ENST00000503982 ESR2Q92731 530 aa25.95■■□□□ 1.74
LSM6-203ENST00000503982 LRCH3Q96II8 777 aa25.95■■□□□ 1.74
LSM6-203ENST00000503982 RANBP2P49792 3224 aaKnown RBP25.95■■□□□ 1.74
LSM6-203ENST00000503982 ZNF536O15090 1300 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 SOX1O00570 391 aaPredicted RBP25.94■■□□□ 1.74
LSM6-203ENST00000503982 PCP11498 1178 aaKnown RBP25.94■■□□□ 1.74
LSM6-203ENST00000503982 SYDE2Q5VT97 1194 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 NSMFQ6X4W1 530 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.94■■□□□ 1.74
LSM6-203ENST00000503982 ZKSCAN3Q9BRR0 538 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 ABHD16BQ9H3Z7 469 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 SPC25Q9HBM1 224 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 A1CFQ9NQ94 594 aaKnown RBP25.94■■□□□ 1.74
LSM6-203ENST00000503982 TCP11L1Q9NUJ3 509 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 PHF24Q9UPV7 400 aa25.94■■□□□ 1.74
LSM6-203ENST00000503982 NOL8Q76FK4 1167 aaKnown RBP25.93■■□□□ 1.74
LSM6-203ENST00000503982 CCDC144CPQ8IYA2 1237 aa25.93■■□□□ 1.74
LSM6-203ENST00000503982 SYNRGQ9UMZ2 1314 aa25.92■■□□□ 1.74
LSM6-203ENST00000503982 NOVP48745 357 aa25.92■■□□□ 1.74
LSM6-203ENST00000503982 MUM1L1Q5H9M0 696 aa25.92■■□□□ 1.74
LSM6-203ENST00000503982 NEDD4P46934 1319 aa25.91■■□□□ 1.74
LSM6-203ENST00000503982 LTBP2Q14767 1821 aa25.91■■□□□ 1.74
LSM6-203ENST00000503982 A0A1W2PQ45 241 aaPredicted RBP25.91■■□□□ 1.74
LSM6-203ENST00000503982 A0A1W2PQY0 241 aa25.91■■□□□ 1.74
LSM6-203ENST00000503982 ASB14A6NK59 587 aa25.91■■□□□ 1.74
LSM6-203ENST00000503982 C6orf222P0C671 652 aaPredicted RBP25.91■■□□□ 1.74
LSM6-203ENST00000503982 CCDC144BQ3MJ40 725 aa25.91■■□□□ 1.74
LSM6-203ENST00000503982 VTI1AQ96AJ9 217 aa25.91■■□□□ 1.74
LSM6-203ENST00000503982 STARD7Q9NQZ5 370 aa25.91■■□□□ 1.74
LSM6-203ENST00000503982 ADAMTS4O75173 837 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 DUSP11O75319 330 aaKnown RBP25.9■■□□□ 1.74
LSM6-203ENST00000503982 ICAM1P05362 532 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 IMMTQ16891 758 aaKnown RBP25.9■■□□□ 1.74
LSM6-203ENST00000503982 IQCA1Q86XH1 822 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 FAM133AQ8N9E0 248 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 NUP133Q8WUM0 1156 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 FGD4Q96M96 766 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 TTC14Q96N46 770 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 RANBP17Q9H2T7 1088 aaKnown RBP25.9■■□□□ 1.74
LSM6-203ENST00000503982 CTNNA3Q9UI47 895 aa25.9■■□□□ 1.74
LSM6-203ENST00000503982 PQBP1O60828 265 aaKnown RBP25.89■■□□□ 1.74
LSM6-203ENST00000503982 PDHBP11177 359 aa25.89■■□□□ 1.74
LSM6-203ENST00000503982 ACLYP53396 1101 aa25.89■■□□□ 1.74
LSM6-203ENST00000503982 TLE2Q04725 743 aa25.89■■□□□ 1.74
LSM6-203ENST00000503982 KCNA10Q16322 511 aa25.89■■□□□ 1.74
LSM6-203ENST00000503982 TSEN34Q9BSV6 310 aaKnown RBP25.89■■□□□ 1.74
LSM6-203ENST00000503982 SOWAHBA6NEL2 793 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 KDM4AO75164 1064 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 SNX17Q15036 470 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 CCDC178Q5BJE1 867 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 BTNL9Q6UXG8 535 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 DSCC1Q9BVC3 393 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 KAT14Q9H8E8 782 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 CYP39A1Q9NYL5 469 aa25.88■■□□□ 1.73
LSM6-203ENST00000503982 PTPDC1A2A3K4 754 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms