RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 FAM160B2Q86V87 743 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 TICAM2Q86XR7 235 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 ANKRD35Q8N283 1001 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 CHURC1Q8WUH1 139 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 XPNPEP3Q9NQH7 507 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 PRR12Q9ULL5 1215 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 DDX49Q9Y6V7 483 aaKnown RBP19.22■□□□□ 0.67
SCLT1-204ENST00000503215 A0A1W2PPC1 479 aa19.21■□□□□ 0.67
SCLT1-204ENST00000503215 RARBP10826 455 aa19.21■□□□□ 0.67
SCLT1-204ENST00000503215 PDE4AP27815 886 aa19.21■□□□□ 0.67
SCLT1-204ENST00000503215 SLC16A2P36021 539 aa19.21■□□□□ 0.67
SCLT1-204ENST00000503215 CHST13Q8NET6 341 aa19.21■□□□□ 0.67
SCLT1-204ENST00000503215 TMEM47Q9BQJ4 181 aa19.21■□□□□ 0.67
SCLT1-204ENST00000503215 ATP11BQ9Y2G3 1177 aa19.21■□□□□ 0.67
SCLT1-204ENST00000503215 ADCY6O43306 1168 aa19.2■□□□□ 0.66
SCLT1-204ENST00000503215 PLA2G6O60733 806 aa19.2■□□□□ 0.66
SCLT1-204ENST00000503215 TRIM60Q495X7 471 aa19.2■□□□□ 0.66
SCLT1-204ENST00000503215 UBE2OQ9C0C9 1292 aaKnown RBP19.2■□□□□ 0.66
SCLT1-204ENST00000503215 RNF146Q9NTX7 359 aa19.2■□□□□ 0.66
SCLT1-204ENST00000503215 ZHX1Q9UKY1 873 aaPredicted RBP19.2■□□□□ 0.66
SCLT1-204ENST00000503215 CNPY2Q9Y2B0 182 aa19.2■□□□□ 0.66
SCLT1-204ENST00000503215 ALAS1P13196 640 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 AKR1A1P14550 325 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 CCDC96Q2M329 555 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 MUM1L1Q5H9M0 696 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 PPP4R3BQ5MIZ7 849 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 AKNAD1Q5T1N1 836 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 IL25Q9H293 177 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 GPCPD1Q9NPB8 672 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 A1CFQ9NQ94 594 aaKnown RBP19.19■□□□□ 0.66
SCLT1-204ENST00000503215 TCP11L1Q9NUJ3 509 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
SCLT1-204ENST00000503215 FBXO40Q9UH90 709 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 ZMYM6O95789 1325 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 NEDD4P46934 1319 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 FRMPD2Q68DX3 1309 aaPredicted RBP19.19■□□□□ 0.66
SCLT1-204ENST00000503215 SYNGAP1Q96PV0 1343 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 MYADML2A6NDP7 307 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 SOWAHBA6NEL2 793 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 ADAMTS4O75173 837 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 FDX1P10109 184 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 TOP1P11387 765 aaKnown RBP19.19■□□□□ 0.66
SCLT1-204ENST00000503215 SNX17Q15036 470 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 MFSD6Q6ZSS7 791 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 ZNF467Q7Z7K2 595 aaPredicted RBP19.19■□□□□ 0.66
SCLT1-204ENST00000503215 MSL3Q8N5Y2 521 aaKnown RBP19.19■□□□□ 0.66
SCLT1-204ENST00000503215 FAM133AQ8N9E0 248 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 TRERF1Q96PN7 1200 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 PURBQ96QR8 312 aaKnown RBP19.19■□□□□ 0.66
SCLT1-204ENST00000503215 ACAD9Q9H845 621 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 PHF24Q9UPV7 400 aa19.19■□□□□ 0.66
SCLT1-204ENST00000503215 MCM3APO60318 1980 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 ACVR2BQ13705 512 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 ARMCX2Q7L311 632 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 CCDC144CPQ8IYA2 1237 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 DCAF4Q8WV16 495 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 ZKSCAN3Q9BRR0 538 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 KATNBL1Q9H079 304 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 DIAPH3Q9NSV4 1193 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 FAM184BQ9ULE4 1060 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 ASTN1O14525 1302 aa19.18■□□□□ 0.66
SCLT1-204ENST00000503215 POTEB2H3BUK9 544 aa19.17■□□□□ 0.66
SCLT1-204ENST00000503215 PTGS1P23219 599 aa19.17■□□□□ 0.66
SCLT1-204ENST00000503215 BTNL9Q6UXG8 535 aa19.17■□□□□ 0.66
SCLT1-204ENST00000503215 TDHQ8IZJ6 230 aa19.17■□□□□ 0.66
SCLT1-204ENST00000503215 SYNRGQ9UMZ2 1314 aa19.17■□□□□ 0.66
SCLT1-204ENST00000503215 PDHBP11177 359 aa19.16■□□□□ 0.66
SCLT1-204ENST00000503215 GSPT1P15170 499 aaKnown RBP19.16■□□□□ 0.66
SCLT1-204ENST00000503215 TLE2Q04725 743 aa19.16■□□□□ 0.66
SCLT1-204ENST00000503215 CCDC144BQ3MJ40 725 aa19.16■□□□□ 0.66
SCLT1-204ENST00000503215 SYDE2Q5VT97 1194 aa19.16■□□□□ 0.66
SCLT1-204ENST00000503215 RNF180Q86T96 592 aa19.16■□□□□ 0.66
SCLT1-204ENST00000503215 KLHDC9Q8NEP7 349 aa19.16■□□□□ 0.66
SCLT1-204ENST00000503215 RANBP17Q9H2T7 1088 aaKnown RBP19.16■□□□□ 0.66
SCLT1-204ENST00000503215 PRDM5Q9NQX1 630 aaPredicted RBP19.16■□□□□ 0.66
SCLT1-204ENST00000503215 CCPG1Q9ULG6 757 aa19.16■□□□□ 0.66
SCLT1-204ENST00000503215 A0A1W2PQ45 241 aaPredicted RBP19.15■□□□□ 0.66
SCLT1-204ENST00000503215 A0A1W2PQY0 241 aa19.15■□□□□ 0.66
SCLT1-204ENST00000503215 TRIM43BA6NCK2 446 aa19.15■□□□□ 0.66
SCLT1-204ENST00000503215 ZNF213O14771 459 aa19.15■□□□□ 0.66
SCLT1-204ENST00000503215 MFAP1P55081 439 aaKnown RBP19.15■□□□□ 0.66
SCLT1-204ENST00000503215 TKFCQ3LXA3 575 aa19.15■□□□□ 0.66
SCLT1-204ENST00000503215 CCSAPQ6IQ19 270 aaPredicted RBP19.15■□□□□ 0.66
SCLT1-204ENST00000503215 TRIM43Q96BQ3 446 aaPredicted RBP19.15■□□□□ 0.66
SCLT1-204ENST00000503215 PDLIM7Q9NR12 457 aa19.15■□□□□ 0.66
SCLT1-204ENST00000503215 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.14■□□□□ 0.65
SCLT1-204ENST00000503215 DUSP11O75319 330 aaKnown RBP19.14■□□□□ 0.65
SCLT1-204ENST00000503215 ICAM1P05362 532 aa19.14■□□□□ 0.65
SCLT1-204ENST00000503215 ITGB8P26012 769 aa19.14■□□□□ 0.65
SCLT1-204ENST00000503215 KCNA10Q16322 511 aa19.14■□□□□ 0.65
SCLT1-204ENST00000503215 LBHD1Q9BQE6 289 aaPredicted RBP19.14■□□□□ 0.65
SCLT1-204ENST00000503215 CPVLQ9H3G5 476 aa19.14■□□□□ 0.65
SCLT1-204ENST00000503215 ABHD16BQ9H3Z7 469 aa19.14■□□□□ 0.65
SCLT1-204ENST00000503215 CYP39A1Q9NYL5 469 aa19.14■□□□□ 0.65
SCLT1-204ENST00000503215 B4E1Z4 1266 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 CTAGE5O15320 804 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 KDM4AO75164 1064 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
SCLT1-204ENST00000503215 GOLGA8HP0CJ92 632 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms