RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 GPATCH2Q9NW75 528 aa11.65□□□□□ -0.54
EXOSC9-203ENST00000503139 RAPGEF3O95398 923 aa11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 POU4F1Q01851 419 aa11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 C21orf62-AS1Q17RA5 79 aa11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 RSPO4Q2I0M5 234 aaPredicted RBP11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 FNDC3BQ53EP0 1204 aaKnown RBP11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 TSPYL5Q86VY4 417 aaPredicted RBP11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 ZDHHC13Q8IUH4 622 aa11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 TMEM145Q8NBT3 493 aa11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 TRIT1Q9H3H1 467 aaKnown RBP11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 SPC25Q9HBM1 224 aa11.64□□□□□ -0.55
EXOSC9-203ENST00000503139 DNAJC6O75061 913 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 SNRPB2P08579 225 aaKnown RBP11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 BMP8BP34820 402 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 MASP1P48740 699 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 CLCN7P51798 805 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 PTPROQ16827 1216 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 DPY19L1Q2PZI1 675 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 GAB4Q2WGN9 574 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 TRIM61Q5EBN2 209 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 SLC35F1Q5T1Q4 408 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 CDKAL1Q5VV42 579 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 CWF19L1Q69YN2 538 aaKnown RBP11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 KCTD13Q8WZ19 329 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 HSPA12BQ96MM6 686 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 LRRC4CQ9HCJ2 640 aa11.63□□□□□ -0.55
EXOSC9-203ENST00000503139 WASH4PA8MWX3 477 aa11.62□□□□□ -0.55
EXOSC9-203ENST00000503139 HSP90B1P14625 803 aaKnown RBP11.62□□□□□ -0.55
EXOSC9-203ENST00000503139 NTRK3Q16288 839 aa11.62□□□□□ -0.55
EXOSC9-203ENST00000503139 TM4SF20Q53R12 229 aa11.62□□□□□ -0.55
EXOSC9-203ENST00000503139 THAP5Q7Z6K1 395 aa11.62□□□□□ -0.55
EXOSC9-203ENST00000503139 COPS5Q92905 334 aa11.62□□□□□ -0.55
EXOSC9-203ENST00000503139 STXBP3O00186 592 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 AURKAO14965 403 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 KCNQ2O43526 872 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 CPP00450 1065 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 CD3EP07766 207 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 SCRN1Q12765 414 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 PRSS53Q2L4Q9 553 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 NIM1KQ8IY84 436 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 KREMEN2Q8NCW0 462 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 MFSD3Q96ES6 412 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 FCRL3Q96P31 734 aaPredicted RBP11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 SLC12A9Q9BXP2 914 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 BRINP2Q9C0B6 783 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 SEMA3GQ9NS98 782 aa11.61□□□□□ -0.55
EXOSC9-203ENST00000503139 PRR19A6NJB7 356 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 H3BS24 57 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 VAV1P15498 845 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 KCNJ6P48051 423 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 DENND5AQ6IQ26 1287 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 PLD6Q8N2A8 252 aaKnown RBP11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 SPOCK3Q9BQ16 436 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 PIM2Q9P1W9 311 aa11.6□□□□□ -0.55
EXOSC9-203ENST00000503139 DYRK3O43781 588 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 ZNF205O95201 554 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 VIL1P09327 827 aaKnown RBP11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 IFNGR1P15260 489 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 TPP2P29144 1249 aaPredicted RBP11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 ECI1P42126 302 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 IFI16Q16666 785 aaKnown RBP11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 DHX37Q8IY37 1157 aaKnown RBP11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 ANKRD13AQ8IZ07 590 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 GSTCDQ8NEC7 633 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 NPLOC4Q8TAT6 608 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 NETO1Q8TDF5 533 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 SFMBT1Q9UHJ3 866 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 BACE2Q9Y5Z0 518 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 PITPNM2Q9BZ72 1349 aa11.59□□□□□ -0.55
EXOSC9-203ENST00000503139 BLACEA4D250 179 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 CYP26A1O43174 497 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 GABREP78334 506 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 RTP2Q5QGT7 225 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 SLC7A14Q8TBB6 771 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 UBE2FQ969M7 185 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 TRIM39Q9HCM9 518 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 ZSWIM5Q9P217 1185 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 SNX11Q9Y5W9 270 aa11.58□□□□□ -0.56
EXOSC9-203ENST00000503139 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 THBDP07204 575 aa11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 FOSL1P15407 271 aa11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 NOP2P46087 812 aaKnown RBP11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 FRS2Q8WU20 508 aa11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 ZC3H7BQ9UGR2 993 aaKnown RBP11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 COL4A3BPQ9Y5P4 624 aa11.57□□□□□ -0.56
EXOSC9-203ENST00000503139 C2orf71A6NGG8 1288 aa11.56□□□□□ -0.56
EXOSC9-203ENST00000503139 SYPP08247 313 aa11.56□□□□□ -0.56
EXOSC9-203ENST00000503139 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
EXOSC9-203ENST00000503139 TESK1Q15569 626 aa11.56□□□□□ -0.56
EXOSC9-203ENST00000503139 RCSD1Q6JBY9 416 aa11.56□□□□□ -0.56
EXOSC9-203ENST00000503139 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
EXOSC9-203ENST00000503139 PTPRN2Q92932 1015 aa11.56□□□□□ -0.56
EXOSC9-203ENST00000503139 RNF112Q9ULX5 631 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms