RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 NUP133Q8WUM0 1156 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 SOCS4Q8WXH5 440 aa29.27■■■□□ 2.28
LSM6-202ENST00000502781 SLC15A5A6NIM6 579 aa29.26■■■□□ 2.28
LSM6-202ENST00000502781 ICAM1P05362 532 aa29.26■■■□□ 2.28
LSM6-202ENST00000502781 ABRAQ8N0Z2 381 aa29.26■■■□□ 2.28
LSM6-202ENST00000502781 AGBL1Q96MI9 1066 aa29.26■■■□□ 2.28
LSM6-202ENST00000502781 NUDT12Q9BQG2 462 aa29.26■■■□□ 2.28
LSM6-202ENST00000502781 UPF3BQ9BZI7 483 aaKnown RBP29.26■■■□□ 2.28
LSM6-202ENST00000502781 KIF5BP33176 963 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 RCAN1P53805 252 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 WDR78Q5VTH9 848 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 CCDC174Q6PII3 467 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 CTCFLQ8NI51 663 aaPredicted RBP29.26■■■□□ 2.27
LSM6-202ENST00000502781 MTMR8Q96EF0 704 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 RIOX1Q9H6W3 641 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 JMJD4Q9H9V9 463 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 IVNS1ABPQ9Y6Y0 642 aa29.26■■■□□ 2.27
LSM6-202ENST00000502781 EVCP57679 992 aa29.25■■■□□ 2.27
LSM6-202ENST00000502781 TKFCQ3LXA3 575 aa29.25■■■□□ 2.27
LSM6-202ENST00000502781 NBPF11Q86T75 865 aa29.25■■■□□ 2.27
LSM6-202ENST00000502781 CHST13Q8NET6 341 aa29.25■■■□□ 2.27
LSM6-202ENST00000502781 BRF1Q92994 677 aa29.25■■■□□ 2.27
LSM6-202ENST00000502781 PLXNB2O15031 1838 aa29.24■■■□□ 2.27
LSM6-202ENST00000502781 HTTP42858 3142 aa29.24■■■□□ 2.27
LSM6-202ENST00000502781 TNS4Q8IZW8 715 aa29.24■■■□□ 2.27
LSM6-202ENST00000502781 FANCBQ8NB91 859 aa29.24■■■□□ 2.27
LSM6-202ENST00000502781 CWC22Q9HCG8 908 aaKnown RBP29.24■■■□□ 2.27
LSM6-202ENST00000502781 PNMA2Q9UL42 364 aa29.24■■■□□ 2.27
LSM6-202ENST00000502781 KLF18A0A0U1RQI7 1052 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 CYTH3O43739 400 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 HOXC6P09630 235 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 XRCC5P13010 732 aaKnown RBP29.23■■■□□ 2.27
LSM6-202ENST00000502781 RXRAP19793 462 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 SMARCA1P28370 1054 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 FGD1P98174 961 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 MAP2K5Q13163 448 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 TOB2Q14106 344 aaPredicted RBP29.23■■■□□ 2.27
LSM6-202ENST00000502781 CDC37Q16543 378 aaPredicted RBP29.23■■■□□ 2.27
LSM6-202ENST00000502781 SYNE3Q6ZMZ3 975 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 MICU3Q86XE3 530 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 RAET1EQ8TD07 263 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 FBXO40Q9UH90 709 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 HPS5Q9UPZ3 1129 aa29.23■■■□□ 2.27
LSM6-202ENST00000502781 FCER1AP12319 257 aa29.22■■■□□ 2.27
LSM6-202ENST00000502781 PXYLP1Q8TE99 480 aa29.22■■■□□ 2.27
LSM6-202ENST00000502781 CCPG1Q9ULG6 757 aa29.22■■■□□ 2.27
LSM6-202ENST00000502781 ZNF236Q9UL36 1845 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 ZBTB43O43298 467 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 ADORA2AP29274 412 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 RGS2P41220 211 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 GNAQP50148 359 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 APOBRQ0VD83 1088 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 RAB11FIP4Q86YS3 637 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 LZTS2Q9BRK4 669 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 SPZ1Q9BXG8 430 aa29.21■■■□□ 2.27
LSM6-202ENST00000502781 ALDH8A1Q9H2A2 487 aaPredicted RBP29.21■■■□□ 2.27
LSM6-202ENST00000502781 RBM25P49756 843 aaKnown RBP29.2■■■□□ 2.26
LSM6-202ENST00000502781 QRICH1Q2TAL8 776 aa29.2■■■□□ 2.26
LSM6-202ENST00000502781 TRERF1Q96PN7 1200 aa29.2■■■□□ 2.26
LSM6-202ENST00000502781 APBA2Q99767 749 aa29.2■■■□□ 2.26
LSM6-202ENST00000502781 VAT1LQ9HCJ6 419 aa29.2■■■□□ 2.26
LSM6-202ENST00000502781 RNF146Q9NTX7 359 aa29.2■■■□□ 2.26
LSM6-202ENST00000502781 PDRG1Q9NUG6 133 aa29.2■■■□□ 2.26
LSM6-202ENST00000502781 NID2Q14112 1375 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 ADCY3O60266 1144 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 ALAS1P13196 640 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 CYP2B6P20813 491 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 KCTD2Q14681 263 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 CCDC144CPQ8IYA2 1237 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 SLAIN1Q8ND83 568 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 ARMC5Q96C12 935 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 MMP19Q99542 508 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 ACAD9Q9H845 621 aa29.19■■■□□ 2.26
LSM6-202ENST00000502781 ZBTB5O15062 677 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 DHX16O60231 1041 aaKnown RBP29.18■■■□□ 2.26
LSM6-202ENST00000502781 COBLO75128 1261 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 PLEKHA8P1O95397 391 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 TAL1P17542 331 aaPredicted RBP29.18■■■□□ 2.26
LSM6-202ENST00000502781 GRK4P32298 578 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 SLC4A3P48751 1232 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 TMTC3Q6ZXV5 915 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 SRBD1Q8N5C6 995 aaKnown RBP29.18■■■□□ 2.26
LSM6-202ENST00000502781 ABHD8Q96I13 439 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 C22orf23Q9BZE7 217 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 HOMER2Q9NSB8 354 aa29.18■■■□□ 2.26
LSM6-202ENST00000502781 FAM217BQ9NTX9 383 aaPredicted RBP29.18■■■□□ 2.26
LSM6-202ENST00000502781 RBM28Q9NW13 759 aaKnown RBP29.18■■■□□ 2.26
LSM6-202ENST00000502781 PPP2R5BQ15173 497 aa29.17■■■□□ 2.26
LSM6-202ENST00000502781 MUM1L1Q5H9M0 696 aa29.17■■■□□ 2.26
LSM6-202ENST00000502781 KIF2CQ99661 725 aa29.17■■■□□ 2.26
LSM6-202ENST00000502781 DNAJC25-GNG10A0A024R161 153 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 SMCHD1A6NHR9 2005 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 IGHA2P01877 340 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 RTN1Q16799 776 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 SLC9C1Q4G0N8 1177 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 NPLOC4Q8TAT6 608 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 PIGSQ96S52 555 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 BACH2Q9BYV9 841 aa29.16■■■□□ 2.26
LSM6-202ENST00000502781 GOLGA8AA7E2F4 631 aa29.15■■■□□ 2.26
LSM6-202ENST00000502781 GOLGA8BA8MQT2 603 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms