RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 SLC15A5A6NIM6 579 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 ICAM1P05362 532 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 PTPREP23469 700 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 FLT3LGP49771 235 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 RCAN1P53805 252 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 SNAP25P60880 206 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 MORN1Q5T089 497 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 CCDC174Q6PII3 467 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 SOCS4Q8WXH5 440 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 BRF1Q92994 677 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
CPNE1-228ENST00000498814 PNMA2Q9UL42 364 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 GABRQQ9UN88 632 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 RIPK3Q9Y572 518 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 IVNS1ABPQ9Y6Y0 642 aa18.12■□□□□ 0.49
CPNE1-228ENST00000498814 KLF18A0A0U1RQI7 1052 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 GNAQP50148 359 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 EVCP57679 992 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 IRF5Q13568 498 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 TKFCQ3LXA3 575 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 ABRAQ8N0Z2 381 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 FANCBQ8NB91 859 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 USP6NLQ92738 828 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 AGBL1Q96MI9 1066 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 NUDT12Q9BQG2 462 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 RIOX1Q9H6W3 641 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 JMJD4Q9H9V9 463 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 FBXO40Q9UH90 709 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 PTCH2Q9Y6C5 1203 aa18.11■□□□□ 0.49
CPNE1-228ENST00000498814 ZBTB43O43298 467 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 DHX16O60231 1041 aaKnown RBP18.1■□□□□ 0.49
CPNE1-228ENST00000498814 RXRAP19793 462 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 RBM25P49756 843 aaKnown RBP18.1■□□□□ 0.49
CPNE1-228ENST00000498814 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 GRB14Q14449 540 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 SLC35G1Q2M3R5 365 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.1■□□□□ 0.49
CPNE1-228ENST00000498814 MICU3Q86XE3 530 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 CHST13Q8NET6 341 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 RAET1EQ8TD07 263 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 MTMR8Q96EF0 704 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 C22orf23Q9BZE7 217 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 ALDH8A1Q9H2A2 487 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-228ENST00000498814 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
CPNE1-228ENST00000498814 VAT1LQ9HCJ6 419 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 CCPG1Q9ULG6 757 aa18.1■□□□□ 0.49
CPNE1-228ENST00000498814 PLXNA1Q9UIW2 1896 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 FCER1AP12319 257 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 MAP2K5Q13163 448 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 TOB2Q14106 344 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-228ENST00000498814 PPP2R5BQ15173 497 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 CDC37Q16543 378 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-228ENST00000498814 NBPF11Q86T75 865 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 RAB11FIP4Q86YS3 637 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 SPZ1Q9BXG8 430 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 BACH2Q9BYV9 841 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 HTTP42858 3142 aa18.09■□□□□ 0.49
CPNE1-228ENST00000498814 CYTH3O43739 400 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 XRCC5P13010 732 aaKnown RBP18.08■□□□□ 0.48
CPNE1-228ENST00000498814 ALAS1P13196 640 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 RGS2P41220 211 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 KCTD2Q14681 263 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 QRICH1Q2TAL8 776 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 CCDC144CPQ8IYA2 1237 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 TNS4Q8IZW8 715 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 PXYLP1Q8TE99 480 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 TRERF1Q96PN7 1200 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 MMP19Q99542 508 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 RNF146Q9NTX7 359 aa18.08■□□□□ 0.48
CPNE1-228ENST00000498814 RBM28Q9NW13 759 aaKnown RBP18.08■□□□□ 0.48
CPNE1-228ENST00000498814 NID2Q14112 1375 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 ZBTB5O15062 677 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 ADCY3O60266 1144 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 PLEKHA8P1O95397 391 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 HOXC6P09630 235 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 ADORA2AP29274 412 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 RTN1Q16799 776 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 TMTC3Q6ZXV5 915 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 SRBD1Q8N5C6 995 aaKnown RBP18.07■□□□□ 0.48
CPNE1-228ENST00000498814 ACAD9Q9H845 621 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
CPNE1-228ENST00000498814 GOLGA8AA7E2F4 631 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 GOLGA8BA8MQT2 603 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 CYP2B6P20813 491 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 GRK4P32298 578 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 FBXO11Q86XK2 927 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 SLAIN1Q8ND83 568 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-228ENST00000498814 PIGSQ96S52 555 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 KIF2CQ99661 725 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 APBA2Q99767 749 aa18.06■□□□□ 0.48
CPNE1-228ENST00000498814 FAM217BQ9NTX9 383 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-228ENST00000498814 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-228ENST00000498814 RBBP6Q7Z6E9 1792 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms