RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 NBPF11Q86T75 865 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 FMR1NBQ8N0W7 255 aaPredicted RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 MEIOBQ8N635 442 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 C3orf58Q8NDZ4 430 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 KIF18AQ8NI77 898 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 DDX17Q92841 729 aaKnown RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 CHMP4CQ96CF2 233 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 NEK1Q96PY6 1258 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 TRIM55Q9BYV6 548 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 TMX1Q9H3N1 280 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 GOLPH3LQ9H4A5 285 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 BTG4Q9NY30 223 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 TLR7Q9NYK1 1049 aaKnown RBP4.54□□□□□ -1.68
CLTC-209ENST00000498711 RTEL1Q9NZ71 1219 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 SIRPGQ9P1W8 387 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 TAF1LQ8IZX4 1826 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 C4AP0C0L4 1744 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 C4BP0C0L5 1744 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 CARMIL3Q8ND23 1372 aa4.54□□□□□ -1.68
CLTC-209ENST00000498711 hCG_2014768A0A024R1R8 64 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 ENPP3O14638 875 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 TNNT1P13805 278 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 EIF4A3P38919 411 aaKnown RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 ZNF165P49910 485 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 LRMPQ12912 555 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 CHAF1AQ13111 956 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 GCKRQ14397 625 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 STX1AQ16623 288 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 EPHA10Q5JZY3 1008 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 KIAA0319Q5VV43 1072 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 TAF3Q5VWG9 929 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 STOX1Q6ZVD7 989 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 CCAR2Q8N163 923 aaKnown RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 GLIS3Q8NEA6 775 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 SNIP1Q8TAD8 396 aaKnown RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 ERO1AQ96HE7 468 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 TMEM74Q96NL1 305 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 EHD4Q9H223 541 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 CNTN3Q9P232 1028 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 PPM1HQ9ULR3 514 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 EFR3BQ9Y2G0 817 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 COL5A3P25940 1745 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 TOGARAM1Q9Y4F4 1720 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 KDM6AO15550 1401 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 UBR2Q8IWV8 1755 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 MYO1BO43795 1136 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 H2AFXP16104 143 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 GBP2P32456 591 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 COL9A2Q14055 689 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 MCMDC2Q4G0Z9 681 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 TNNI3KQ59H18 835 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 DNTTIP2Q5QJE6 756 aaKnown RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 ZMYM1Q5SVZ6 1142 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 RNF187Q5TA31 235 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 C11orf57Q6ZUT1 292 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 DHX32Q7L7V1 743 aaKnown RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 ZNF397Q8NF99 534 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 BRF1Q92994 677 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 SRPK1Q96SB4 655 aaKnown RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 INSM2Q96T92 566 aaPredicted RBP4.53□□□□□ -1.68
CLTC-209ENST00000498711 FPGT-TNNI3KV9GXZ4 949 aa4.53□□□□□ -1.68
CLTC-209ENST00000498711 VPS37CA5D8V6 355 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 H7C1W4 665 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 JAK2O60674 1132 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 DDX58O95786 925 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 EGFRP00533 1210 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 CYP21A2P08686 494 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FDPSP14324 419 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 EIF2S2P20042 333 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 IBSPP21815 317 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 CES1P23141 567 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 U2AF2P26368 475 aaKnown RBP eCLIP4.52□□□□□ -1.69
CLTC-209ENST00000498711 SOX9P48436 509 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 GSDMDP57764 484 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 CBX1P83916 185 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FAM160A1Q05DH4 1040 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 NCAPHQ15003 741 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FOXD4L6Q3SYB3 417 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 ARSJQ5FYB0 599 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 CEP135Q66GS9 1140 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ADALQ6DHV7 355 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FAM173BQ6P4H8 233 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FOXD4L3Q6VB84 417 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 LRRC69Q6ZNQ3 347 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 Q6ZUG5 572 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ANKS3Q6ZW76 656 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ANKRD24Q8TF21 1146 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 TIGD1Q96MW7 591 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 TSEN34Q9BSV6 310 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 POLMQ9NP87 494 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 ATG3Q9NT62 314 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ANO10Q9NW15 660 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 C9orf78Q9NZ63 289 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 CLIP2Q9UDT6 1046 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 DBNLQ9UJU6 430 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 KIF13BQ9NQT8 1826 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 MAP3K15Q6ZN16 1313 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 MINDY4BA8MYZ0 360 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ATP8B1O43520 1251 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 GRNP28799 593 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms