RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	PNMA1	Q8ND90	353 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	NPLOC4	Q8TAT6	608 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	CRISPLD2	Q9H0B8	497 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	NRBP1	Q9UHY1	535 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	RBM8A	Q9Y5S9	174 aa	Known RBP	12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	TNKS	O95271	1327 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	MKI67	P46013	3256 aa	Known RBP	12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	TNRC18	O15417	2968 aa	Predicted RBP	12.31	□□□□□ -0.44
FXR1-222	ENST00000498658		E7EWF7	191 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	COBL	O75128	1261 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	ICAM1	P05362	532 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	SLC4A3	P48751	1232 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	TRIM32	Q13049	653 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	ASPRV1	Q53RT3	343 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	SYDE2	Q5VT97	1194 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	SHISA4	Q96DD7	197 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	MAML3	Q96JK9	1138 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	MTA3	Q9BTC8	594 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	RANBP17	Q9H2T7	1088 aa	Known RBP	12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	ACAD9	Q9H845	621 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	GPCPD1	Q9NPB8	672 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	ANO2	Q9NQ90	1003 aa		12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.31	□□□□□ -0.44
FXR1-222	ENST00000498658	IGHA2	P01877	340 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	VASP	P50552	380 aa	Predicted RBP	12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	ZNF792	Q3KQV3	632 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	HTATIP2	Q9BUP3	242 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	LSG1	Q9H089	658 aa	Known RBP	12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	FLRT1	Q9NZU1	646 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	OGDHL	Q9ULD0	1010 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	CCPG1	Q9ULG6	757 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	RIPK3	Q9Y572	518 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	PFAS	O15067	1338 aa		12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.3	□□□□□ -0.44
FXR1-222	ENST00000498658	DNAJC25-GNG10	A0A024R161	153 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	IFIT3	O14879	490 aa	Known RBP	12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	FARP2	O94887	1054 aa	Predicted RBP	12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	PGK2	P07205	417 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	PARP1	P09874	1014 aa	Known RBP	12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	PRR29	P0C7W0	189 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	CNGA1	P29973	690 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	CYP2C19	P33261	490 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	SLC16A2	P36021	539 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	TTBK2	Q6IQ55	1244 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	CCDC174	Q6PII3	467 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	TMTC2	Q8N394	836 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	CHMP4C	Q96CF2	233 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	TRERF1	Q96PN7	1200 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	TINF2	Q9BSI4	451 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	MAF1	Q9H063	256 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	RNF146	Q9NTX7	359 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	CNPY2	Q9Y2B0	182 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	ZNF536	O15090	1300 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	WDR19	Q8NEZ3	1342 aa		12.29	□□□□□ -0.44
FXR1-222	ENST00000498658	SEPT4	O43236	478 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	ALAS1	P13196	640 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	CYBA	P13498	195 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	CCND3	P30281	292 aa	Predicted RBP	12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	MCM5	P33992	734 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	WTAP	Q15007	396 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	NECTIN1	Q15223	517 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	SEC23A	Q15436	765 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	MAMDC4	Q6UXC1	1216 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	CYB5R4	Q7L1T6	521 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	NECAB2	Q7Z6G3	386 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	SKAP1	Q86WV1	359 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	AGBL1	Q96MI9	1066 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	HOMER2	Q9NSB8	354 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	DDX20	Q9UHI6	824 aa	Known RBP	12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	SYNGAP1	Q96PV0	1343 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	PDE4DIP	Q5VU43	2346 aa		12.28	□□□□□ -0.44
FXR1-222	ENST00000498658	PLXNA1	Q9UIW2	1896 aa		12.27	□□□□□ -0.44
FXR1-222	ENST00000498658	POTEB2	H3BUK9	544 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	SLC27A2	O14975	620 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	TRAF1	Q13077	416 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	KRT32	Q14532	448 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	TMEM67	Q5HYA8	995 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	CREB3L3	Q68CJ9	461 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	LHX8	Q68G74	356 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	RASGRP2	Q7LDG7	609 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	UBE2Q1	Q7Z7E8	422 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	CATIP	Q7Z7H3	387 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	ARRDC4	Q8NCT1	418 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	TMEM87B	Q96K49	555 aa		12.27	□□□□□ -0.45
FXR1-222	ENST00000498658	LOC102724159	A0A0B4J2E5	919 aa		12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	ASB14	A6NK59	587 aa		12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	DHX16	O60231	1041 aa	Known RBP	12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	REC8	O95072	547 aa		12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	GOLGA8H	P0CJ92	632 aa		12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	PWP2	Q15269	919 aa	Known RBP	12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	PRPF38B	Q5VTL8	546 aa	Known RBP	12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	STOX1	Q6ZVD7	989 aa		12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	MPHOSPH6	Q99547	160 aa	Known RBP	12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	MAP3K14	Q99558	947 aa		12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	A1CF	Q9NQ94	594 aa	Known RBP	12.26	□□□□□ -0.45
FXR1-222	ENST00000498658	ADD3	Q9UEY8	706 aa	Known RBP	12.26	□□□□□ -0.45
FXR1-222	ENST00000498658		B4DLN1	442 aa		12.25	□□□□□ -0.45
FXR1-222	ENST00000498658	KLRF2	D3W0D1	207 aa		12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms