RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TOX2Q96NM4 488 aa14.31□□□□□ -0.12
CNOT4-211ENST00000498534 GUCD1Q96NT3 240 aa14.31□□□□□ -0.12
CNOT4-211ENST00000498534 NAPBQ9H115 298 aa14.31□□□□□ -0.12
CNOT4-211ENST00000498534 SEMA6BQ9H3T3 888 aa14.31□□□□□ -0.12
CNOT4-211ENST00000498534 ABHD16BQ9H3Z7 469 aa14.31□□□□□ -0.12
CNOT4-211ENST00000498534 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
CNOT4-211ENST00000498534 STARD7Q9NQZ5 370 aa14.31□□□□□ -0.12
CNOT4-211ENST00000498534 ISY1Q9ULR0 285 aaKnown RBP14.31□□□□□ -0.12
CNOT4-211ENST00000498534 ADAMTS4O75173 837 aa14.3□□□□□ -0.12
CNOT4-211ENST00000498534 TFAP4Q01664 338 aa14.3□□□□□ -0.12
CNOT4-211ENST00000498534 IKQ13123 557 aaPredicted RBP14.3□□□□□ -0.12
CNOT4-211ENST00000498534 ANKRD33Q7Z3H0 272 aa14.3□□□□□ -0.12
CNOT4-211ENST00000498534 LRRC47Q8N1G4 583 aaKnown RBP14.3□□□□□ -0.12
CNOT4-211ENST00000498534 PCSK9Q8NBP7 692 aaKnown RBP14.3□□□□□ -0.12
CNOT4-211ENST00000498534 KLHDC9Q8NEP7 349 aa14.3□□□□□ -0.12
CNOT4-211ENST00000498534 GLT1D1Q96MS3 346 aa14.3□□□□□ -0.12
CNOT4-211ENST00000498534 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
CNOT4-211ENST00000498534 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
CNOT4-211ENST00000498534 C19orf67A6NJJ6 358 aa14.29□□□□□ -0.12
CNOT4-211ENST00000498534 TMEM232C9JQI7 657 aa14.29□□□□□ -0.12
CNOT4-211ENST00000498534 C6orf222P0C671 652 aaPredicted RBP14.29□□□□□ -0.12
CNOT4-211ENST00000498534 FPGSQ05932 587 aa14.29□□□□□ -0.12
CNOT4-211ENST00000498534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
CNOT4-211ENST00000498534 LENG1Q96BZ8 264 aaPredicted RBP14.29□□□□□ -0.12
CNOT4-211ENST00000498534 RNPC3Q96LT9 517 aaKnown RBP14.29□□□□□ -0.12
CNOT4-211ENST00000498534 CDX2Q99626 313 aaPredicted RBP14.29□□□□□ -0.12
CNOT4-211ENST00000498534 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.29□□□□□ -0.12
CNOT4-211ENST00000498534 ELP1O95163 1332 aa14.29□□□□□ -0.12
CNOT4-211ENST00000498534 SYNRGQ9UMZ2 1314 aa14.29□□□□□ -0.12
CNOT4-211ENST00000498534 ITGB8P26012 769 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 SLC1A4P43007 532 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 STAT2P52630 851 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 PPARAQ07869 468 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 FAAP100Q0VG06 881 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 LTBP2Q14767 1821 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 CCDC144BQ3MJ40 725 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 GNASQ5JWF2 1037 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 MROH7Q68CQ1 1323 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 FAM160B2Q86V87 743 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.28□□□□□ -0.12
CNOT4-211ENST00000498534 STAG1Q8WVM7 1258 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 SEC62Q99442 399 aaKnown RBP14.28□□□□□ -0.12
CNOT4-211ENST00000498534 GREB1LQ9C091 1923 aaPredicted RBP14.28□□□□□ -0.12
CNOT4-211ENST00000498534 HOMER2Q9NSB8 354 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 MYH4Q9Y623 1939 aa14.28□□□□□ -0.12
CNOT4-211ENST00000498534 TIMP1P01033 207 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 MCCP23508 829 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 GJA9P57773 515 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 ZMYM1Q5SVZ6 1142 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 CCSAPQ6IQ19 270 aaPredicted RBP14.27□□□□□ -0.13
CNOT4-211ENST00000498534 CCDC174Q6PII3 467 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 NOL8Q76FK4 1167 aaKnown RBP14.27□□□□□ -0.13
CNOT4-211ENST00000498534 PI4K2BQ8TCG2 481 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 GMCL1Q96IK5 515 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 ACAD9Q9H845 621 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
CNOT4-211ENST00000498534 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
CNOT4-211ENST00000498534 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
CNOT4-211ENST00000498534 TSPY2A6NKD2 308 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 PLA2G6O60733 806 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 ASGR1P07306 291 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 MX1P20591 662 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
CNOT4-211ENST00000498534 EPHB4P54760 987 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 RCSD1Q6JBY9 416 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 PCDHB15Q9Y5E8 787 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 UNC80Q8N2C7 3258 aa14.26□□□□□ -0.13
CNOT4-211ENST00000498534 PLIN4Q96Q06 1357 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 TMEM265A0A087WTH1 108 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 ASB14A6NK59 587 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 ARVCFO00192 962 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 TLR3O15455 904 aaKnown RBP14.25□□□□□ -0.13
CNOT4-211ENST00000498534 CDK7P50613 346 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 CNTN2Q02246 1040 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 TNFAIP2Q03169 654 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 MFSD5Q6N075 450 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 AGBL1Q96MI9 1066 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 TRERF1Q96PN7 1200 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 UPF3AQ9H1J1 476 aaKnown RBP14.25□□□□□ -0.13
CNOT4-211ENST00000498534 RNF146Q9NTX7 359 aa14.25□□□□□ -0.13
CNOT4-211ENST00000498534 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
CNOT4-211ENST00000498534 MYADML2A6NDP7 307 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
CNOT4-211ENST00000498534 ALAS1P13196 640 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 PPIGQ13427 754 aaKnown RBP eCLIP14.24□□□□□ -0.13
CNOT4-211ENST00000498534 ANKRD45Q5TZF3 282 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 KCTD1Q719H9 257 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 TMEM199Q8N511 208 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 MAFAQ8NHW3 353 aaPredicted RBP14.24□□□□□ -0.13
CNOT4-211ENST00000498534 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
CNOT4-211ENST00000498534 MYLIPQ8WY64 445 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 FGD4Q96M96 766 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
CNOT4-211ENST00000498534 TTYH1Q9H313 450 aaPredicted RBP14.24□□□□□ -0.13
CNOT4-211ENST00000498534 A1CFQ9NQ94 594 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms