RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 RNF180Q86T96 592 aa26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 FBXO40Q9UH90 709 aa26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 CTDP1Q9Y5B0 961 aaPredicted RBP26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 LRRC37A2A6NM11 1700 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 A0A1W2PQ45 241 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 A0A1W2PQY0 241 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 TRIM43BA6NCK2 446 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 ORC4O43929 436 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 SLC1A4P43007 532 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 ANKRD35Q8N283 1001 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 DEFB123Q8N688 67 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 STAG1Q8WVM7 1258 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 TRIM43Q96BQ3 446 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 HOMER2Q9NSB8 354 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 PRKAG2Q9UGJ0 569 aa26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 ZHX1Q9UKY1 873 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-208ENST00000498124 PLA2G6O60733 806 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 FDX1P10109 184 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 TLE2Q04725 743 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 KCTD1Q719H9 257 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 ZNF589Q86UQ0 364 aaPredicted RBP26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 FAM160B2Q86V87 743 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 KLHDC9Q8NEP7 349 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 AGBL1Q96MI9 1066 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 KATNBL1Q9H079 304 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 PRDM5Q9NQX1 630 aaPredicted RBP26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 PPP4R2Q9NY27 417 aa26.7■■□□□ 1.86
CDKN2A-208ENST00000498124 MYADML2A6NDP7 307 aa26.69■■□□□ 1.86
CDKN2A-208ENST00000498124 MCMDC2Q4G0Z9 681 aa26.69■■□□□ 1.86
CDKN2A-208ENST00000498124 PPP4R3BQ5MIZ7 849 aa26.69■■□□□ 1.86
CDKN2A-208ENST00000498124 CCSAPQ6IQ19 270 aaPredicted RBP26.69■■□□□ 1.86
CDKN2A-208ENST00000498124 FAM184BQ9ULE4 1060 aa26.69■■□□□ 1.86
CDKN2A-208ENST00000498124 ISY1Q9ULR0 285 aaKnown RBP26.69■■□□□ 1.86
CDKN2A-208ENST00000498124 ZMYM6O95789 1325 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 A0A0C4DFX4 3053 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 RANBP6O60518 1105 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 FGAP02671 866 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 IRX5P78411 483 aaPredicted RBP26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 CNTN2Q02246 1040 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 NMIQ13287 307 aaPredicted RBP26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 ACVR2BQ13705 512 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 ARMCX2Q7L311 632 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 TICAM2Q86XR7 235 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 FAM133AQ8N9E0 248 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 CHURC1Q8WUH1 139 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 ACAD9Q9H845 621 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 A1CFQ9NQ94 594 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 RNF146Q9NTX7 359 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 LCTP09848 1927 aa26.68■■□□□ 1.86
CDKN2A-208ENST00000498124 HSPD1P10809 573 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 ITGB8P26012 769 aa26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 SNAP25P60880 206 aa26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 RCSD1Q6JBY9 416 aa26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 PLEKHM2Q8IWE5 1019 aa26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 BADQ92934 168 aa26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 TSEN34Q9BSV6 310 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 PRR12Q9ULL5 1215 aa26.67■■□□□ 1.86
CDKN2A-208ENST00000498124 ASTN1O14525 1302 aa26.66■■□□□ 1.86
CDKN2A-208ENST00000498124 DUSP11O75319 330 aaKnown RBP26.66■■□□□ 1.86
CDKN2A-208ENST00000498124 ACLYP53396 1101 aa26.66■■□□□ 1.86
CDKN2A-208ENST00000498124 CCDC144CPQ8IYA2 1237 aa26.66■■□□□ 1.86
CDKN2A-208ENST00000498124 ABHD16BQ9H3Z7 469 aa26.66■■□□□ 1.86
CDKN2A-208ENST00000498124 MTMR10Q9NXD2 777 aa26.66■■□□□ 1.86
CDKN2A-208ENST00000498124 SOWAHBA6NEL2 793 aa26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 CST5P28325 142 aaPredicted RBP26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 IKQ13123 557 aaPredicted RBP26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 CCDC144BQ3MJ40 725 aa26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 C9orf50Q5SZB4 431 aa26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 UPF3AQ9H1J1 476 aaKnown RBP26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 OSBPL3Q9H4L5 887 aa26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 CCDC171Q6TFL3 1326 aa26.65■■□□□ 1.86
CDKN2A-208ENST00000498124 CLTBP09497 229 aa26.64■■□□□ 1.86
CDKN2A-208ENST00000498124 SHHQ15465 462 aa26.64■■□□□ 1.86
CDKN2A-208ENST00000498124 TKFCQ3LXA3 575 aa26.64■■□□□ 1.86
CDKN2A-208ENST00000498124 CCDC174Q6PII3 467 aa26.64■■□□□ 1.86
CDKN2A-208ENST00000498124 MOXD2PA6NHM9 499 aa26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 POTEB2H3BUK9 544 aa26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 PQBP1O60828 265 aaKnown RBP26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 KCNA10Q16322 511 aa26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 MUM1L1Q5H9M0 696 aa26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 DCAF4Q8WV16 495 aa26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 TRERF1Q96PN7 1200 aa26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 MTMR7Q9Y216 660 aa26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 DDX49Q9Y6V7 483 aaKnown RBP26.63■■□□□ 1.85
CDKN2A-208ENST00000498124 LAMA4Q16363 1823 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 TRIM6-TRIM34B2RNG4 842 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 KIAA0355O15063 1070 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 CTAGE5O15320 804 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 ALAS1P13196 640 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 PDE4AP27815 886 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 HAND2P61296 217 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 RRP12Q5JTH9 1297 aaKnown RBP26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 TTBK2Q6IQ55 1244 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 ANKRD33Q7Z3H0 272 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 TBC1D10CQ8IV04 446 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 TMEM47Q9BQJ4 181 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 RANBP17Q9H2T7 1088 aaKnown RBP26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 STARD7Q9NQZ5 370 aa26.62■■□□□ 1.85
CDKN2A-208ENST00000498124 TCP11L1Q9NUJ3 509 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms