RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 FGD1P98174 961 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 MTFR1Q15390 333 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 TMEM67Q5HYA8 995 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 CREB3L3Q68CJ9 461 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
PTPRN-218ENST00000497977 MAP3K14Q99558 947 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 LSG1Q9H089 658 aaKnown RBP12.12□□□□□ -0.47
PTPRN-218ENST00000497977 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
PTPRN-218ENST00000497977 NEDD4P46934 1319 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 LOC102724159A0A0B4J2E5 919 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 PEX10O60683 326 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 PSMA5P28066 241 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 LIFRP42702 1097 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 CACNB2Q08289 660 aaPredicted RBP12.11□□□□□ -0.47
PTPRN-218ENST00000497977 PWP2Q15269 919 aaKnown RBP12.11□□□□□ -0.47
PTPRN-218ENST00000497977 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPRN-218ENST00000497977 NECAB2Q7Z6G3 386 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 REPS2Q8NFH8 660 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 CTCFLQ8NI51 663 aaPredicted RBP12.11□□□□□ -0.47
PTPRN-218ENST00000497977 TRIB2Q92519 343 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 MAML3Q96JK9 1138 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 TINF2Q9BSI4 451 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
PTPRN-218ENST00000497977 SPC25Q9HBM1 224 aa12.11□□□□□ -0.47
PTPRN-218ENST00000497977 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 SLC27A2O14975 620 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 SMARCA1P28370 1054 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 SLC16A2P36021 539 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 ZNF792Q3KQV3 632 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 RNF146Q9NTX7 359 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 MAP3K20Q9NYL2 800 aaKnown RBP12.1□□□□□ -0.47
PTPRN-218ENST00000497977 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
PTPRN-218ENST00000497977 NR2E3Q9Y5X4 410 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 SLC12A7Q9Y666 1083 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 TACC3Q9Y6A5 838 aa12.1□□□□□ -0.47
PTPRN-218ENST00000497977 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
PTPRN-218ENST00000497977 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 SEPT4O43236 478 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 PRC1O43663 620 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 COBLO75128 1261 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 SEC23AQ15436 765 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
PTPRN-218ENST00000497977 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 DPF3Q92784 378 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 AGBL1Q96MI9 1066 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 AMNQ9BXJ7 453 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 DDX20Q9UHI6 824 aaKnown RBP12.09□□□□□ -0.47
PTPRN-218ENST00000497977 FAM184BQ9ULE4 1060 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 RIPK3Q9Y572 518 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 WDR19Q8NEZ3 1342 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
PTPRN-218ENST00000497977 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 DDAH1O94760 285 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 FARP2O94887 1054 aaPredicted RBP12.08□□□□□ -0.48
PTPRN-218ENST00000497977 PGK2P07205 417 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 GOLGA8HP0CJ92 632 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 RARBP10826 455 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 CYP2C19P33261 490 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 CCL14Q16627 93 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 TTBK2Q6IQ55 1244 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 MAMDC4Q6UXC1 1216 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 NSMFQ6X4W1 530 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 RNF207Q6ZRF8 634 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 CYB5R4Q7L1T6 521 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 RNF180Q86T96 592 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 FBXO11Q86XK2 927 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 IGDCC4Q8TDY8 1250 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 UBA5Q9GZZ9 404 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 OGDHLQ9ULD0 1010 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 ABCB11O95342 1321 aa12.08□□□□□ -0.48
PTPRN-218ENST00000497977 PTPDC1A2A3K4 754 aa12.07□□□□□ -0.48
PTPRN-218ENST00000497977 PALM3A6NDB9 673 aaPredicted RBP12.07□□□□□ -0.48
PTPRN-218ENST00000497977 AKR1A1P14550 325 aa12.07□□□□□ -0.48
PTPRN-218ENST00000497977 DNERQ8NFT8 737 aa12.07□□□□□ -0.48
PTPRN-218ENST00000497977 NUP133Q8WUM0 1156 aa12.07□□□□□ -0.48
PTPRN-218ENST00000497977 SEC63Q9UGP8 760 aaKnown RBP12.07□□□□□ -0.48
PTPRN-218ENST00000497977 DNAJC25-GNG10A0A024R161 153 aa12.06□□□□□ -0.48
PTPRN-218ENST00000497977 KBTBD13C9JR72 458 aa12.06□□□□□ -0.48
PTPRN-218ENST00000497977 ZBTB5O15062 677 aa12.06□□□□□ -0.48
PTPRN-218ENST00000497977 CDC37Q16543 378 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-218ENST00000497977 C8orf34Q49A92 452 aa12.06□□□□□ -0.48
PTPRN-218ENST00000497977 IQSEC1Q6DN90 963 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms