RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 C12orf60Q5U649 245 aa19.87■□□□□ 0.77
VIM-208ENST00000497849 AACSQ86V21 672 aa19.87■□□□□ 0.77
VIM-208ENST00000497849 WNT8AQ9H1J5 351 aa19.87■□□□□ 0.77
VIM-208ENST00000497849 GOPCQ9HD26 462 aa19.87■□□□□ 0.77
VIM-208ENST00000497849 PCDHA11Q9Y5I1 949 aa19.87■□□□□ 0.77
VIM-208ENST00000497849 LRRC37A2A6NM11 1700 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 RFXAPO00287 272 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 RAD21O60216 631 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 POU3F3P20264 500 aaPredicted RBP19.86■□□□□ 0.77
VIM-208ENST00000497849 SKIV2LQ15477 1246 aaKnown RBP19.86■□□□□ 0.77
VIM-208ENST00000497849 C16orf86Q6ZW13 317 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 NUP88Q99567 741 aaPredicted RBP19.86■□□□□ 0.77
VIM-208ENST00000497849 SLF1Q9BQI6 1058 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.86■□□□□ 0.77
VIM-208ENST00000497849 MTCH2Q9Y6C9 303 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 SLC4A7Q9Y6M7 1214 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 MUC6Q6W4X9 2439 aa19.86■□□□□ 0.77
VIM-208ENST00000497849 ASTN1O14525 1302 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 GRIN2DO15399 1336 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 SLFNL1Q499Z3 407 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 TMEM31Q5JXX7 168 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 CXCL17Q6UXB2 119 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.85■□□□□ 0.77
VIM-208ENST00000497849 ARMCX2Q7L311 632 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 NOC4LQ9BVI4 516 aaKnown RBP19.85■□□□□ 0.77
VIM-208ENST00000497849 C11orf16Q9NQ32 467 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 ATP8A2Q9NTI2 1148 aa19.85■□□□□ 0.77
VIM-208ENST00000497849 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.84■□□□□ 0.77
VIM-208ENST00000497849 ATP2A1O14983 1001 aa19.84■□□□□ 0.77
VIM-208ENST00000497849 TLL1O43897 1013 aa19.84■□□□□ 0.77
VIM-208ENST00000497849 KHSRPQ92945 711 aaKnown RBP eCLIP19.84■□□□□ 0.77
VIM-208ENST00000497849 USP17L12C9JPN9 530 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 USP17L21D6R901 530 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 GOLIM4O00461 696 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 MBD4O95243 580 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 SLC4A3P48751 1232 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 ITGA7Q13683 1181 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 CCDC144CPQ8IYA2 1237 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 CPXCR1Q8N123 301 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 TRPV6Q9H1D0 765 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 EXOC6BQ9Y2D4 811 aa19.83■□□□□ 0.77
VIM-208ENST00000497849 EPOPA6NHQ4 379 aa19.82■□□□□ 0.76
VIM-208ENST00000497849 B4GALT4O60513 344 aa19.82■□□□□ 0.76
VIM-208ENST00000497849 KRT40Q6A162 431 aa19.82■□□□□ 0.76
VIM-208ENST00000497849 ANKRD35Q8N283 1001 aa19.82■□□□□ 0.76
VIM-208ENST00000497849 SCLYQ96I15 445 aa19.82■□□□□ 0.76
VIM-208ENST00000497849 GNEQ9Y223 722 aaKnown RBP19.82■□□□□ 0.76
VIM-208ENST00000497849 ZBBXA8MT70 800 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 GPR37L1O60883 481 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 CABYRO75952 493 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 CA3P07451 260 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 ATP2A2P16615 1042 aaKnown RBP19.81■□□□□ 0.76
VIM-208ENST00000497849 PTGS1P23219 599 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 RPUSD2Q8IZ73 545 aaKnown RBP19.81■□□□□ 0.76
VIM-208ENST00000497849 PRPF38AQ8NAV1 312 aaKnown RBP19.81■□□□□ 0.76
VIM-208ENST00000497849 AGBL1Q96MI9 1066 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 DNAJC2Q99543 621 aaKnown RBP19.81■□□□□ 0.76
VIM-208ENST00000497849 CERS4Q9HA82 394 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 RAVER2Q9HCJ3 691 aaKnown RBP19.81■□□□□ 0.76
VIM-208ENST00000497849 IL1RAPL2Q9NP60 686 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 COG5Q9UP83 839 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 SCN5AQ14524 2016 aa19.81■□□□□ 0.76
VIM-208ENST00000497849 BRWD1Q9NSI6 2320 aa19.8■□□□□ 0.76
VIM-208ENST00000497849 F5H6K3 240 aa19.8■□□□□ 0.76
VIM-208ENST00000497849 GTPBP6O43824 516 aaPredicted RBP19.8■□□□□ 0.76
VIM-208ENST00000497849 NDUFB10O96000 172 aa19.8■□□□□ 0.76
VIM-208ENST00000497849 TNFAIP2Q03169 654 aa19.8■□□□□ 0.76
VIM-208ENST00000497849 KLRC3Q07444 240 aa19.8■□□□□ 0.76
VIM-208ENST00000497849 TTLL4Q14679 1199 aa19.8■□□□□ 0.76
VIM-208ENST00000497849 ZKSCAN2Q63HK3 967 aa19.8■□□□□ 0.76
VIM-208ENST00000497849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.8■□□□□ 0.76
VIM-208ENST00000497849 ZBED9Q6R2W3 1325 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 ZBED4O75132 1171 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 CHGBP05060 677 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 ADD2P35612 726 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 CNTN2Q02246 1040 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 FSCN1Q16658 493 aaKnown RBP19.79■□□□□ 0.76
VIM-208ENST00000497849 TMEM67Q5HYA8 995 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 CEP85Q6P2H3 762 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 CTR9Q6PD62 1173 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 ERC1Q8IUD2 1116 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 SLC38A10Q9HBR0 1119 aa19.79■□□□□ 0.76
VIM-208ENST00000497849 MYH4Q9Y623 1939 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 FAM86C2PA6NEL3 165 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 ARHGEF15O94989 841 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 PSMC6P62333 389 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 NOL8Q76FK4 1167 aaKnown RBP19.78■□□□□ 0.76
VIM-208ENST00000497849 TLK2Q86UE8 772 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 AMOTL1Q8IY63 956 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 FAM133AQ8N9E0 248 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 CHST13Q8NET6 341 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 SEZ6LQ9BYH1 1024 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 FBXO40Q9UH90 709 aa19.78■□□□□ 0.76
VIM-208ENST00000497849 SMPD1P17405 629 aa19.77■□□□□ 0.76
VIM-208ENST00000497849 RHPN1Q8TCX5 695 aa19.77■□□□□ 0.76
VIM-208ENST00000497849 HLA-CQ95604 372 aa19.77■□□□□ 0.76
VIM-208ENST00000497849 KIFC2Q96AC6 838 aa19.77■□□□□ 0.76
VIM-208ENST00000497849 CD320Q9NPF0 282 aa19.77■□□□□ 0.76
VIM-208ENST00000497849 NYAP2Q9P242 653 aa19.77■□□□□ 0.76
VIM-208ENST00000497849 MYH7P12883 1935 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms