RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 GPR155Q7Z3F1 870 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 NCAPG2Q86XI2 1143 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 KIF18BQ86Y91 864 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SUGP1Q8IWZ8 645 aaKnown RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 STK11IPQ8N1F8 1099 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 MEIOBQ8N635 442 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SMC1BQ8NDV3 1235 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 C1orf162Q8NEQ5 155 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 OR2W6PQ8NHA6 318 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 POF1BQ8WVV4 589 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 USP7Q93009 1102 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 TTC17Q96AE7 1141 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ITPKCQ96DU7 683 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 MRGPRX2Q96LB1 330 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SGCZQ96LD1 299 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 NAP1L5Q96NT1 182 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 TAAR9Q96RI9 348 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 TSEN34Q9BSV6 310 aaKnown RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 LGR4Q9BXB1 951 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 KLHL25Q9H0H3 589 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 CSRNP2Q9H175 543 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 CLEC4MQ9H2X3 399 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 CRISPLD1Q9H336 500 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ZFAND3Q9H8U3 227 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.36□□□□□ -2.03
UBR4-217ENST00000497018 BRD7Q9NPI1 651 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 NLRC4Q9NPP4 1024 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PRDM6Q9NQX0 595 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 AAASQ9NRG9 546 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ATG3Q9NT62 314 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 TLR7Q9NYK1 1049 aaKnown RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 HCN2Q9UL51 889 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PDZRN3Q9UPQ7 1066 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 DMTF1Q9Y222 760 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 FAM50BQ9Y247 325 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 GPR52Q9Y2T5 361 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SLC45A1Q9Y2W3 748 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGA9Q9Y5G4 932 aaKnown RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGA8Q9Y5G5 932 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGA7Q9Y5G6 932 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGA6Q9Y5G7 932 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGA3Q9Y5H0 932 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGA2Q9Y5H1 932 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 C3P01024 1663 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ADAMTS12P58397 1594 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ZCCHC11Q5TAX3 1644 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 ZNF142P52746 1687 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 SHANK2Q9UPX8 1470 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 A0A1B0GVC2 190 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 TTC24A2A3L6 582 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 ANKRD34BA5PLL1 514 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 TRIM75PA6NK02 468 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 hCG_1984214I3L0E3 225 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 AGRPO00253 132 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PDE2AO00408 941 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 DLL1O00548 723 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PRODHO43272 600 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SPINT1O43278 529 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 OPA1O60313 960 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 DLX3O60479 287 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 EFCAB14O75071 495 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 HIP1RO75146 1068 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 ZIC2O95409 532 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 AGR2O95994 175 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 ZBED1O96006 694 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 HRGP04196 525 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PSAPP07602 524 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 FAM157BP0CG42 384 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SETSIPP0DME0 302 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 MYBL2P10244 700 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 VDRP11473 427 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 TIMP2P16035 220 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 KCNA6P17658 529 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 LMNB1P20700 586 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 RRM1P23921 792 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 MSX1P28360 303 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 DDIT3P35638 169 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SLC19A1P41440 591 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PHKA2P46019 1235 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 CEBPAP49715 358 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 ZNF157P51786 506 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 NEK4P51957 841 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PMS1P54277 932 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 AK2P54819 239 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 NRLP54845 237 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 EIF5P55010 431 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 GABREP78334 506 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 MLLT1Q03111 559 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 PPP2R3AQ06190 1150 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PCDH1Q08174 1060 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 HYAL2Q12891 473 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 CCINQ13939 588 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PUM3Q15397 648 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 CCDC96Q2M329 555 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 NBPF8Q3BBV2 869 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 WDR44Q5JSH3 913 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 WIPI1Q5MNZ9 446 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 CREB3L3Q68CJ9 461 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PPP4R3AQ6IN85 833 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 ZCCHC8Q6NZY4 707 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms