RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 SEC23AQ15436 765 aa18.98■□□□□ 0.63
ITGB5-210ENST00000496703 PRAMEF19Q5SWL8 479 aa18.98■□□□□ 0.63
ITGB5-210ENST00000496703 MFSD14CQ5VZR4 134 aa18.98■□□□□ 0.63
ITGB5-210ENST00000496703 IQCA1Q86XH1 822 aa18.98■□□□□ 0.63
ITGB5-210ENST00000496703 CPVLQ9H3G5 476 aa18.98■□□□□ 0.63
ITGB5-210ENST00000496703 CNNM2Q9H8M5 875 aa18.98■□□□□ 0.63
ITGB5-210ENST00000496703 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
ITGB5-210ENST00000496703 CTDP1Q9Y5B0 961 aaPredicted RBP18.98■□□□□ 0.63
ITGB5-210ENST00000496703 E7EWF7 191 aa18.97■□□□□ 0.63
ITGB5-210ENST00000496703 FARP2O94887 1054 aaPredicted RBP18.97■□□□□ 0.63
ITGB5-210ENST00000496703 FDX1P10109 184 aa18.97■□□□□ 0.63
ITGB5-210ENST00000496703 NT5C2P49902 561 aa18.97■□□□□ 0.63
ITGB5-210ENST00000496703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.97■□□□□ 0.63
ITGB5-210ENST00000496703 PNMA1Q8ND90 353 aa18.97■□□□□ 0.63
ITGB5-210ENST00000496703 FGD4Q96M96 766 aa18.97■□□□□ 0.63
ITGB5-210ENST00000496703 RANBP17Q9H2T7 1088 aaKnown RBP18.97■□□□□ 0.63
ITGB5-210ENST00000496703 SENP2Q9HC62 589 aa18.97■□□□□ 0.63
ITGB5-210ENST00000496703 OGDHLQ9ULD0 1010 aa18.97■□□□□ 0.63
ITGB5-210ENST00000496703 DNAJC25-GNG10A0A024R161 153 aa18.96■□□□□ 0.63
ITGB5-210ENST00000496703 CCDC178Q5BJE1 867 aa18.96■□□□□ 0.63
ITGB5-210ENST00000496703 SYDE2Q5VT97 1194 aa18.96■□□□□ 0.63
ITGB5-210ENST00000496703 ANTXR2P58335 489 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 MUM1L1Q5H9M0 696 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 CHST3Q7LGC8 479 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 CHST13Q8NET6 341 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 PAWRQ96IZ0 340 aaKnown RBP18.95■□□□□ 0.62
ITGB5-210ENST00000496703 KAT14Q9H8E8 782 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 RNF146Q9NTX7 359 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 SLC5A4Q9NY91 659 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 DIS3Q9Y2L1 958 aaKnown RBP18.95■□□□□ 0.62
ITGB5-210ENST00000496703 TRIOBPQ9H2D6 2365 aa18.95■□□□□ 0.62
ITGB5-210ENST00000496703 ALAS1P13196 640 aa18.94■□□□□ 0.62
ITGB5-210ENST00000496703 TRERF1Q96PN7 1200 aa18.94■□□□□ 0.62
ITGB5-210ENST00000496703 TINF2Q9BSI4 451 aa18.94■□□□□ 0.62
ITGB5-210ENST00000496703 UBAC1Q9BSL1 405 aa18.94■□□□□ 0.62
ITGB5-210ENST00000496703 UBA5Q9GZZ9 404 aa18.94■□□□□ 0.62
ITGB5-210ENST00000496703 ACAD9Q9H845 621 aa18.94■□□□□ 0.62
ITGB5-210ENST00000496703 ICAM1P05362 532 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 CNGA1P29973 690 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 TRDNQ13061 729 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 NECTIN1Q15223 517 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 MB21D2Q8IYB1 491 aaPredicted RBP18.93■□□□□ 0.62
ITGB5-210ENST00000496703 ANKRD35Q8N283 1001 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 NCOA7Q8NI08 942 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 ANO2Q9NQ90 1003 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 A1CFQ9NQ94 594 aaKnown RBP18.93■□□□□ 0.62
ITGB5-210ENST00000496703 FBXO40Q9UH90 709 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 DDX20Q9UHI6 824 aaKnown RBP18.93■□□□□ 0.62
ITGB5-210ENST00000496703 CCPG1Q9ULG6 757 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 LRRC37A2A6NM11 1700 aa18.93■□□□□ 0.62
ITGB5-210ENST00000496703 SLC27A2O14975 620 aa18.92■□□□□ 0.62
ITGB5-210ENST00000496703 CDC45O75419 566 aa18.92■□□□□ 0.62
ITGB5-210ENST00000496703 SNAI1O95863 264 aaPredicted RBP18.92■□□□□ 0.62
ITGB5-210ENST00000496703 CNTN2Q02246 1040 aa18.92■□□□□ 0.62
ITGB5-210ENST00000496703 IFIT1BQ5T764 474 aaKnown RBP18.92■□□□□ 0.62
ITGB5-210ENST00000496703 ANO1Q5XXA6 986 aa18.92■□□□□ 0.62
ITGB5-210ENST00000496703 STAG2Q8N3U4 1231 aa18.92■□□□□ 0.62
ITGB5-210ENST00000496703 GPHNQ9NQX3 736 aaPredicted RBP18.92■□□□□ 0.62
ITGB5-210ENST00000496703 DDX49Q9Y6V7 483 aaKnown RBP18.92■□□□□ 0.62
ITGB5-210ENST00000496703 ZNF865P0CJ78 1059 aaPredicted RBP18.91■□□□□ 0.62
ITGB5-210ENST00000496703 TKFCQ3LXA3 575 aa18.91■□□□□ 0.62
ITGB5-210ENST00000496703 GPATCH4Q5T3I0 446 aaKnown RBP18.91■□□□□ 0.62
ITGB5-210ENST00000496703 CREB3L3Q68CJ9 461 aa18.91■□□□□ 0.62
ITGB5-210ENST00000496703 FAM133AQ8N9E0 248 aa18.91■□□□□ 0.62
ITGB5-210ENST00000496703 ANKLE1Q8NAG6 615 aa18.91■□□□□ 0.62
ITGB5-210ENST00000496703 PURBQ96QR8 312 aaKnown RBP18.91■□□□□ 0.62
ITGB5-210ENST00000496703 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
ITGB5-210ENST00000496703 ASTN1O14525 1302 aa18.91■□□□□ 0.62
ITGB5-210ENST00000496703 NFIBO00712 420 aa18.9■□□□□ 0.62
ITGB5-210ENST00000496703 IFIT3O14879 490 aaKnown RBP18.9■□□□□ 0.62
ITGB5-210ENST00000496703 SEPT4O43236 478 aa18.9■□□□□ 0.62
ITGB5-210ENST00000496703 CAPN2P17655 700 aa18.9■□□□□ 0.62
ITGB5-210ENST00000496703 PRPF38BQ5VTL8 546 aaKnown RBP18.9■□□□□ 0.62
ITGB5-210ENST00000496703 MAMDC4Q6UXC1 1216 aa18.9■□□□□ 0.62
ITGB5-210ENST00000496703 RALYLQ86SE5 291 aaKnown RBP18.9■□□□□ 0.62
ITGB5-210ENST00000496703 IGDCC4Q8TDY8 1250 aa18.9■□□□□ 0.62
ITGB5-210ENST00000496703 PFASO15067 1338 aa18.9■□□□□ 0.62
ITGB5-210ENST00000496703 SOWAHBA6NEL2 793 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
ITGB5-210ENST00000496703 PARP1P09874 1014 aaKnown RBP18.89■□□□□ 0.61
ITGB5-210ENST00000496703 SLC35G1Q2M3R5 365 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 ASPRV1Q53RT3 343 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 NECAB2Q7Z6G3 386 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 ADGRF4Q8IZF3 695 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 CLEC4DQ8WXI8 215 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 LENG1Q96BZ8 264 aaPredicted RBP18.89■□□□□ 0.61
ITGB5-210ENST00000496703 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 MAD2L2Q9UI95 211 aa18.89■□□□□ 0.61
ITGB5-210ENST00000496703 COL6A1P12109 1028 aa18.88■□□□□ 0.61
ITGB5-210ENST00000496703 CDC37Q16543 378 aaPredicted RBP18.88■□□□□ 0.61
ITGB5-210ENST00000496703 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
ITGB5-210ENST00000496703 ZNF467Q7Z7K2 595 aaPredicted RBP18.88■□□□□ 0.61
ITGB5-210ENST00000496703 DPF3Q92784 378 aa18.88■□□□□ 0.61
ITGB5-210ENST00000496703 JMJD4Q9H9V9 463 aa18.88■□□□□ 0.61
ITGB5-210ENST00000496703 SYNGAP1Q96PV0 1343 aa18.88■□□□□ 0.61
ITGB5-210ENST00000496703 LAMA3Q16787 3333 aa18.87■□□□□ 0.61
ITGB5-210ENST00000496703 POTEB2H3BUK9 544 aa18.87■□□□□ 0.61
ITGB5-210ENST00000496703 MSCO60682 206 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms