RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 CNNM3Q8NE01 707 aa17.34■□□□□ 0.37
COL15A1-204ENST00000496686 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
COL15A1-204ENST00000496686 CBX8Q9HC52 389 aa17.34■□□□□ 0.37
COL15A1-204ENST00000496686 CNOT7Q9UIV1 285 aaKnown RBP17.34■□□□□ 0.37
COL15A1-204ENST00000496686 TUBE1Q9UJT0 475 aa17.34■□□□□ 0.37
COL15A1-204ENST00000496686 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.37
COL15A1-204ENST00000496686 ZNF541Q9H0D2 1346 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 H7C1D1 291 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 PLA2G6O60733 806 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 ASNSP08243 561 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 LMNB1P20700 586 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 MCM7P33993 719 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 ZNF165P49910 485 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 MRPL12P52815 198 aaKnown RBP17.33■□□□□ 0.36
COL15A1-204ENST00000496686 INF2Q27J81 1249 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 SYDE2Q5VT97 1194 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 NEK8Q86SG6 692 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 CUL5Q93034 780 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 HOOK2Q96ED9 719 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 TEPSINQ96N21 525 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.36
COL15A1-204ENST00000496686 GJA3Q9Y6H8 435 aa17.33■□□□□ 0.36
COL15A1-204ENST00000496686 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
COL15A1-204ENST00000496686 PPP1R11O60927 126 aaPredicted RBP17.32■□□□□ 0.36
COL15A1-204ENST00000496686 SLC16A2P36021 539 aa17.32■□□□□ 0.36
COL15A1-204ENST00000496686 NLRP12P59046 1061 aa17.32■□□□□ 0.36
COL15A1-204ENST00000496686 CDC37Q16543 378 aaPredicted RBP17.32■□□□□ 0.36
COL15A1-204ENST00000496686 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
COL15A1-204ENST00000496686 APOBEC3FQ8IUX4 373 aaKnown RBP17.32■□□□□ 0.36
COL15A1-204ENST00000496686 COA7Q96BR5 231 aa17.32■□□□□ 0.36
COL15A1-204ENST00000496686 NAP1L4Q99733 375 aaKnown RBP17.32■□□□□ 0.36
COL15A1-204ENST00000496686 BPIFA3Q9BQP9 254 aa17.32■□□□□ 0.36
COL15A1-204ENST00000496686 DNAJC25Q9H1X3 360 aa17.32■□□□□ 0.36
COL15A1-204ENST00000496686 CLK2P49760 499 aaKnown RBP17.31■□□□□ 0.36
COL15A1-204ENST00000496686 LONRF3Q496Y0 759 aa17.31■□□□□ 0.36
COL15A1-204ENST00000496686 HS1BP3Q53T59 392 aa17.31■□□□□ 0.36
COL15A1-204ENST00000496686 GPC2Q8N158 579 aa17.31■□□□□ 0.36
COL15A1-204ENST00000496686 SYMPKQ92797 1274 aaKnown RBP17.31■□□□□ 0.36
COL15A1-204ENST00000496686 VCPKMTQ9H867 229 aa17.31■□□□□ 0.36
COL15A1-204ENST00000496686 VWA3AA6NCI4 1184 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 POLR2DO15514 142 aaKnown RBP17.3■□□□□ 0.36
COL15A1-204ENST00000496686 ACTN4O43707 911 aaKnown RBP17.3■□□□□ 0.36
COL15A1-204ENST00000496686 TXLNAP40222 546 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 MDM2Q00987 491 aaPredicted RBP17.3■□□□□ 0.36
COL15A1-204ENST00000496686 SPECC1Q5M775 1068 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 DTHD1Q6ZMT9 781 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 FAM160B2Q86V87 743 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 HACL1Q9UJ83 578 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
COL15A1-204ENST00000496686 TMEM232C9JQI7 657 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 RAD21O60216 631 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 EGFRP00533 1210 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 SLFN14P0C7P3 912 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 AP3B2Q13367 1082 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 IQCB1Q15051 598 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 POSTNQ15063 836 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 TBC1D10BQ4KMP7 808 aaPredicted RBP17.29■□□□□ 0.36
COL15A1-204ENST00000496686 JAKMIP3Q5VZ66 844 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 DCAF15Q66K64 600 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 MIGA2Q7L4E1 593 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 SAMD7Q7Z3H4 446 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 FBXO11Q86XK2 927 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 ACER1Q8TDN7 264 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 TBCKQ8TEA7 893 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 CHURC1Q8WUH1 139 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 TRIM44Q96DX7 344 aaPredicted RBP17.29■□□□□ 0.36
COL15A1-204ENST00000496686 AK8Q96MA6 479 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 PSTPIP2Q9H939 334 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 GPRC5DQ9NZD1 345 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
COL15A1-204ENST00000496686 SERTAD1Q9UHV2 236 aa17.29■□□□□ 0.36
COL15A1-204ENST00000496686 DICER1Q9UPY3 1922 aaKnown RBP17.28■□□□□ 0.36
COL15A1-204ENST00000496686 NEMFO60524 1076 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 CTNND1O60716 968 aaKnown RBP17.28■□□□□ 0.36
COL15A1-204ENST00000496686 GCFC2P16383 781 aaKnown RBP17.28■□□□□ 0.36
COL15A1-204ENST00000496686 STAT2P52630 851 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 IL17AQ16552 155 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 C11orf57Q6ZUT1 292 aaPredicted RBP17.28■□□□□ 0.36
COL15A1-204ENST00000496686 USP49Q70CQ1 688 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 SH3RF1Q7Z6J0 888 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 TRIML1Q8N9V2 468 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
COL15A1-204ENST00000496686 PCDHA1Q9Y5I3 950 aa17.28■□□□□ 0.36
COL15A1-204ENST00000496686 GOLGA6L19H0YKK7 550 aa17.27■□□□□ 0.36
COL15A1-204ENST00000496686 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
COL15A1-204ENST00000496686 SMC2O95347 1197 aa17.27■□□□□ 0.36
COL15A1-204ENST00000496686 ECE1P42892 770 aa17.27■□□□□ 0.36
COL15A1-204ENST00000496686 IKQ13123 557 aaPredicted RBP17.27■□□□□ 0.36
COL15A1-204ENST00000496686 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
COL15A1-204ENST00000496686 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms