RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 CTNNA3Q9UI47 895 aa12.37□□□□□ -0.43
ERGIC3-219ENST00000496172 A0A0G2JMZ2 1700 aa12.37□□□□□ -0.43
ERGIC3-219ENST00000496172 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
ERGIC3-219ENST00000496172 TMEM232C9JQI7 657 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 MCCP23508 829 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 PDE4AP27815 886 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 CNGA1P29973 690 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 NT5C2P49902 561 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 STAT2P52630 851 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 SNRNP48Q6IEG0 339 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 CPXCR1Q8N123 301 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 TCP11L1Q9NUJ3 509 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 MYH4Q9Y623 1939 aa12.36□□□□□ -0.43
ERGIC3-219ENST00000496172 ATP2A1O14983 1001 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 NMT2O60551 498 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 COBLO75128 1261 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 IGHA2P01877 340 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 CYP2C19P33261 490 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 OAZ1P54368 228 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 STAG1Q8WVM7 1258 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 ESR2Q92731 530 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 DSCC1Q9BVC3 393 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
ERGIC3-219ENST00000496172 PLA2G6O60733 806 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 NOVP48745 357 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 BADQ92934 168 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 MAML3Q96JK9 1138 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 TTC14Q96N46 770 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 RAVER2Q9HCJ3 691 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 PDLIM7Q9NR12 457 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 FBXO40Q9UH90 709 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 MTMR7Q9Y216 660 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 DIS3Q9Y2L1 958 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 TACC3Q9Y6A5 838 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 PARP14Q460N5 1801 aa12.34□□□□□ -0.43
ERGIC3-219ENST00000496172 PGK2P07205 417 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 SLC39A5Q6ZMH5 540 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 TMEM47Q9BQJ4 181 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 ATP11BQ9Y2G3 1177 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 CHD9Q3L8U1 2897 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 RAD50Q92878 1312 aa12.33□□□□□ -0.44
ERGIC3-219ENST00000496172 CYBAP13498 195 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 GRIN2CQ14957 1233 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 ZNF792Q3KQV3 632 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 IQCA1Q86XH1 822 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 ASB2Q96Q27 587 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 KRT23Q9C075 422 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 NRBP1Q9UHY1 535 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 RIPK3Q9Y572 518 aa12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
ERGIC3-219ENST00000496172 SEPT4O43236 478 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 DNAJB2P25686 324 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 TKFCQ3LXA3 575 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 TRIM60Q495X7 471 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 DGKHQ86XP1 1220 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 PRDM5Q9NQX1 630 aaPredicted RBP12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 PRR12Q9ULL5 1215 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 CNPY2Q9Y2B0 182 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 NEDD4P46934 1319 aa12.31□□□□□ -0.44
ERGIC3-219ENST00000496172 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 KDM4AO75164 1064 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 CHMLP26374 656 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 PRAMEF19Q5SWL8 479 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 TRIM43Q96BQ3 446 aaPredicted RBP12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 UHRF1Q96T88 793 aaPredicted RBP12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 C1QTNF1Q9BXJ1 281 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 ACAD9Q9H845 621 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
ERGIC3-219ENST00000496172 DNAJC25-GNG10A0A024R161 153 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms