RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 REPS2Q8NFH8 660 aa13.92□□□□□ -0.18
APTX-233ENST00000496030 SMCR8Q8TEV9 937 aaPredicted RBP13.92□□□□□ -0.18
APTX-233ENST00000496030 ATG4CQ96DT6 458 aa13.92□□□□□ -0.18
APTX-233ENST00000496030 GUCD1Q96NT3 240 aa13.92□□□□□ -0.18
APTX-233ENST00000496030 FEM1BQ9UK73 627 aa13.92□□□□□ -0.18
APTX-233ENST00000496030 BRPF3Q9ULD4 1205 aa13.92□□□□□ -0.18
APTX-233ENST00000496030 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
APTX-233ENST00000496030 A0A0G2JMZ2 1700 aa13.92□□□□□ -0.18
APTX-233ENST00000496030 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 ERICH2A1L162 156 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 VWA5AO00534 786 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 GOLGA8HP0CJ92 632 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 FAM110CQ1W6H9 321 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 SLC35G1Q2M3R5 365 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 TMTC2Q8N394 836 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 ANKRD13CQ8N6S4 541 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 PRPF38AQ8NAV1 312 aaKnown RBP13.91□□□□□ -0.18
APTX-233ENST00000496030 SLF1Q9BQI6 1058 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 UPF3BQ9BZI7 483 aaKnown RBP13.91□□□□□ -0.18
APTX-233ENST00000496030 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 RABGAP1Q9Y3P9 1069 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 COL11A1P12107 1806 aaPredicted RBP13.91□□□□□ -0.18
APTX-233ENST00000496030 DNAH12Q6ZR08 3092 aa13.91□□□□□ -0.18
APTX-233ENST00000496030 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
APTX-233ENST00000496030 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
APTX-233ENST00000496030 SLC16A2P36021 539 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 RBM25P49756 843 aaKnown RBP13.9□□□□□ -0.18
APTX-233ENST00000496030 IRF5Q13568 498 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 GRM4Q14833 912 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 Q6ZUG5 572 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 STAG2Q8N3U4 1231 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 C22orf23Q9BZE7 217 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
APTX-233ENST00000496030 CPVLQ9H3G5 476 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 PRDM6Q9NQX0 595 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 MAD2L2Q9UI95 211 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 PRR12Q9ULL5 1215 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 SMCHD1A6NHR9 2005 aa13.9□□□□□ -0.18
APTX-233ENST00000496030 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
APTX-233ENST00000496030 MUC3AQ02505 3323 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 STAT2P52630 851 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 EVCP57679 992 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 ERVK-24P63145 666 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 TOB2Q14106 344 aaPredicted RBP13.89□□□□□ -0.19
APTX-233ENST00000496030 TMEM132BQ14DG7 1078 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
APTX-233ENST00000496030 CATIPQ7Z7H3 387 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 GPRC5AQ8NFJ5 357 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
APTX-233ENST00000496030 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 FAM161BQ96MY7 647 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 MAP3K14Q99558 947 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 PAGR1Q9BTK6 254 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
APTX-233ENST00000496030 UBA5Q9GZZ9 404 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
APTX-233ENST00000496030 SLC38A10Q9HBR0 1119 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 ZNF214Q9UL59 606 aaPredicted RBP13.89□□□□□ -0.19
APTX-233ENST00000496030 CYP46A1Q9Y6A2 500 aa13.89□□□□□ -0.19
APTX-233ENST00000496030 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
APTX-233ENST00000496030 DDAH1O94760 285 aa13.88□□□□□ -0.19
APTX-233ENST00000496030 PARP1P09874 1014 aaKnown RBP13.88□□□□□ -0.19
APTX-233ENST00000496030 ASPRV1Q53RT3 343 aa13.88□□□□□ -0.19
APTX-233ENST00000496030 APOA5Q6Q788 366 aa13.88□□□□□ -0.19
APTX-233ENST00000496030 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
APTX-233ENST00000496030 MB21D1Q8N884 522 aa13.88□□□□□ -0.19
APTX-233ENST00000496030 BRF1Q92994 677 aa13.88□□□□□ -0.19
APTX-233ENST00000496030 PORCNQ9H237 461 aa13.88□□□□□ -0.19
APTX-233ENST00000496030 ZNF536O15090 1300 aa13.88□□□□□ -0.19
APTX-233ENST00000496030 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 CAPN2P17655 700 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 RXRAP19793 462 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 SNAP25P60880 206 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 APOBRQ0VD83 1088 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 RAB11FIP4Q86YS3 637 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 TBC1D32Q96NH3 1257 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 MOV10L1Q9BXT6 1211 aaKnown RBP13.87□□□□□ -0.19
APTX-233ENST00000496030 SPATC1LQ9H0A9 340 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 RANBP17Q9H2T7 1088 aaKnown RBP13.87□□□□□ -0.19
APTX-233ENST00000496030 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
APTX-233ENST00000496030 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 CDH23Q9H251 3354 aa13.87□□□□□ -0.19
APTX-233ENST00000496030 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
APTX-233ENST00000496030 CYTH3O43739 400 aa13.86□□□□□ -0.19
APTX-233ENST00000496030 FDX1P10109 184 aa13.86□□□□□ -0.19
APTX-233ENST00000496030 TRIM32Q13049 653 aa13.86□□□□□ -0.19
APTX-233ENST00000496030 ADGRF4Q8IZF3 695 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms