RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 HSP90AB2PQ58FF8 381 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 METTL16Q86W50 562 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 FAM9BQ8IZU0 186 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 BCO2Q9BYV7 579 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 U3KQE9 123 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 RTL1A6NKG5 1358 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 FLT4P35916 1363 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 COL18A1P39060 1754 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
GAPVD1-218ENST00000495588 DIAPH1O60610 1272 aaKnown RBP7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 OXCT1P55809 520 aa7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 HDLBPQ00341 1268 aaKnown RBP7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 AP3B2Q13367 1082 aa7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 SMYD4Q8IYR2 804 aaPredicted RBP7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 TCF12Q99081 682 aa7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 LMCD1Q9NZU5 365 aa7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 CPDO75976 1380 aa7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 KIF24Q5T7B8 1368 aa7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 KIAA0232Q92628 1395 aa7.27□□□□□ -1.25
GAPVD1-218ENST00000495588 LMO7Q8WWI1 1683 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 JCADQ9P266 1359 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 SLFN14P0C7P3 912 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 IL13P35225 146 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 HNRNPUQ00839 825 aaKnown RBP eCLIP7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 EIF4A2Q14240 407 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 WDR43Q15061 677 aaKnown RBP eCLIP7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 CHRNA2Q15822 529 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 NXPE4Q6UWF7 544 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 SYDE1Q6ZW31 735 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 TMEM87AQ8NBN3 555 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 C3orf58Q8NDZ4 430 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 IP6K1Q92551 441 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 LIN37Q96GY3 246 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 FANCD2OSQ96PS1 177 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 PRDM11Q9NQV5 511 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 PRDM7Q9NQW5 492 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 RGPD1P0DJD0 1748 aa7.26□□□□□ -1.25
GAPVD1-218ENST00000495588 U2SURPO15042 1029 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 LEFTY1O75610 366 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 ITIH2P19823 946 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 ID3Q02535 119 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 PTPN12Q05209 780 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 IKZF1Q13422 519 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 ASB11Q8WXH4 323 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 LTV1Q96GA3 475 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 YTHDC1Q96MU7 727 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 C8orf37Q96NL8 207 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 DUSP23Q9BVJ7 150 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 ZNF576Q9H609 170 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 ABCB6Q9NP58 842 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 RAPGEFL1Q9UHV5 662 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 PLAGL2Q9UPG8 496 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 SNX11Q9Y5W9 270 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 ABCC6O95255 1503 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 RGPD2P0DJD1 1756 aa7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 BLMP54132 1417 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-218ENST00000495588 LRP6O75581 1613 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 COL14A1Q05707 1796 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 FAM83GA6ND36 823 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 RNGTTO60942 597 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 GADD45BO75293 160 aaPredicted RBP7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 USP17L7P0C7H9 530 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 U2AF1L5P0DN76 240 aaPredicted RBP7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 XRCC5P13010 732 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 LIG1P18858 919 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 GSTT1P30711 240 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 AFMP43652 599 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 U2AF1Q01081 240 aaKnown RBP eCLIP7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 ZP2Q05996 745 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 RAD51AP2Q09MP3 1159 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 MPZL3Q6UWV2 235 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 TTLL10Q6ZVT0 673 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 EHD4Q9H223 541 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 PPM1HQ9ULR3 514 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 NUDCQ9Y266 331 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 CAMTA1Q9Y6Y1 1673 aa7.24□□□□□ -1.25
GAPVD1-218ENST00000495588 PLCH1Q4KWH8 1693 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 NFIBO00712 420 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 HMOX1P09601 288 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 ITPKAP23677 461 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 ZNF76P36508 570 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 BUD31P41223 144 aaPredicted RBP7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 TAF1CQ15572 869 aaPredicted RBP7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 CCDC146Q8IYE0 955 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 RNF34Q969K3 372 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 TNKS2Q9H2K2 1166 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 PCOLCE2Q9UKZ9 415 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 CTNND2Q9UQB3 1225 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 SPATA31A6Q5VVP1 1343 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 IGSF1Q8N6C5 1336 aa7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 COL5A2P05997 1499 aaPredicted RBP7.23□□□□□ -1.25
GAPVD1-218ENST00000495588 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.22□□□□□ -1.25
GAPVD1-218ENST00000495588 GLI1P08151 1106 aa7.22□□□□□ -1.25
GAPVD1-218ENST00000495588 NBPF6Q5VWK0 638 aa7.22□□□□□ -1.25
GAPVD1-218ENST00000495588 USHBP1Q8N6Y0 703 aa7.22□□□□□ -1.25
GAPVD1-218ENST00000495588 NBPF4Q96M43 638 aa7.22□□□□□ -1.25
GAPVD1-218ENST00000495588 NOC4LQ9BVI4 516 aaKnown RBP7.22□□□□□ -1.25
GAPVD1-218ENST00000495588 PPP4R2Q9NY27 417 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms